| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0007 |
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| Symbol | |
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| ID | 6986249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 5554 |
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| End bp | 6225 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378380 |
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| Product | putative amino-acid ABC transporter, permease protein |
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| Protein accession | YP_002261569 |
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| Protein GI | 209693641 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000426634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGATTTG ATTTTGCGTA TATGATTGAG CTCTTACCTA TACTATTTAA ATACTTAGGT
ACGACACTCG AAATGGCAGT ATGGGGGTTA TTCTTTGCCT TAGCGCTCGC GTTAGTGCTA
GCTAACCTAA GAGTATTTAA AGTCCCTGTA CTTGATCAAC TCAGCCAACT TTACATCAGT
TTCTTTCGAG GTACGCCTTT ATTGGTGCAA TTGTTTCTTC TTTATTATGG GCTTCCTCAA
GTCTTTCCTA TTTTTGTTGG CTTAGATGCA TTTAGTGCTG CTGTCATAGG CTTAACACTT
CATTTTGCTG CCTATATGGC AGAAAGTATT CGTGCCGCAA TTATCGGTGT TGATCGCAGT
CAAATGGAAG CCAGTCTTTC GATAGGAATG ACAACCTCTC AAGCGATGCG CCGAATCATT
CTTCCTCAAG CCACACGAAT TGCGTTACCT TCTTTAATGA ATTATTTCAT TGATATGATT
AAATCGACGT CATTAGCTTT TACACTCGGT GTTTCTGAGA TTATGGCAAA AGCACAGATG
GAAGCCTCTT CCAGTTTTAA ATTTTTTGAG GCGTTTTTAG CGGTTGCTCT TATCTATTGG
GGTGTCGTCA TTATTCTTAC TCAAGTCCAA ACTTGGGCTG AAAAAAAATT AAATAAGGCC
TATGTACGAT GA
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| Protein sequence | MGFDFAYMIE LLPILFKYLG TTLEMAVWGL FFALALALVL ANLRVFKVPV LDQLSQLYIS
FFRGTPLLVQ LFLLYYGLPQ VFPIFVGLDA FSAAVIGLTL HFAAYMAESI RAAIIGVDRS
QMEASLSIGM TTSQAMRRII LPQATRIALP SLMNYFIDMI KSTSLAFTLG VSEIMAKAQM
EASSSFKFFE AFLAVALIYW GVVIILTQVQ TWAEKKLNKA YVR
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