| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0001 |
|---|
| Symbol | mioC |
|---|
| ID | 6989445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 312 |
|---|
| End bp | 746 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643378374 |
|---|
| Product | flavodoxin |
|---|
| Protein accession | YP_002261563 |
|---|
| Protein GI | 209693635 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0716] Flavodoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG CATCAATTAT TACAGGTAGC ACCCTTGGTG CTGCTGAATA CGTTGGCGAC
CATATCGCAG ATTTATTAGA AGAAATGGAC TTTGCTACTG ATATTCATAA TCAACCAATT
CTCTCTGAAA TTGATACAAA AGGCCTCTGG ATTTTGGTCG TATCAACACA TGGTGCAGGG
GATTATCCAG ACAACATAAA GCCTTTTATT CAAGAGTTAG AAGAAGGTTC GCAAGACTTA
TCAGATGTCG AGTTCGCCAT CATCGCTATT GGTGATTCTA ACTACGATAC CTTCTGTGCT
GCTGGAAAAT CATTACAAAA AGTACTTCAT AATCGCAATG TAAAAGAAAT ATTTCCATTA
TTAGAGATTG ATGTCACTCA AAACCCAATA CCAGAGGAAC CTGCTGAGTT GTGGTTAAAA
CAACACATAT GTTAA
|
|---|
| Protein sequence | MKNASIITGS TLGAAEYVGD HIADLLEEMD FATDIHNQPI LSEIDTKGLW ILVVSTHGAG
DYPDNIKPFI QELEEGSQDL SDVEFAIIAI GDSNYDTFCA AGKSLQKVLH NRNVKEIFPL
LEIDVTQNPI PEEPAELWLK QHIC
|
|---|
| |