Gene VSAL_p840_55 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_55 
Symbol 
ID6961466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand
Start bp59510 
End bp61699 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content33% 
IMG OID 
Productputative beta-N-acetylhexosaminidase precursor 
Protein accessionYP_002261545 
Protein GI215778405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000313171 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGGA TTACCCAATT TGCTTTAATG TATTTATTGT CATTGCCTTT ACTCGCTAGC 
TCTTTAACTC CATTGGCGGA TGATTATATA GAGAAAAATG GGCTAAGAAA ATCAGCTGCT
CAATTGCTAG TAACAGGAAT TGTCGCCGAC TATAATAACT TCTCGTATAA TAAAAAAACG
CAAGAATTAT TAAATCTGAA TGTGGGCGGG ATTATTATAA ATGCCTACAA TGTTCCTGTT
CCTCACAATA CAAATAACCG TAATCATGCA ATACAAATAA TAAAAGATTT TACTAATTCA
ATTCGTAGTG TTCATGTAGA TGGGAGTGAT CTTTTAATTG CTGTAGATTT TGAAAGTTAT
AGGTATACAT CTCTTCGGTA TCCTTTAATT GCACCTCCAA GCGCACTTAC GTTATCAGCT
AACAATTCTA CTAAGTCTGC ATTTAATGCC GGAGATGATG CCGGTAGACA ATTAGAAAAT
GTAGGTGTGA ACGTTATACT CGGCCCAGTA TTGGATAAAG ACTCAAAGTT ACAGGGTACA
AGAAATACAA ACTTAATGAA TAGAAGTTTT GGTAGTGATT CTAAGGTTAT TTCCGTATTT
GCTTCCGAGT TTATTAGGGG AGTAAGTAAT AATAGAGTAG CGACATTTGC AAAACACTTT
CCTGGGTATG GTTTTGTTGA TTCAAATCCA CATAATGACG ATAAGGTCGA TATTAACGCT
CCAAGAAAAA CAATAATTGA GGATTTAAAG CCATTTAGTA ATACGAGTTC TCTACTTTCT
GGAGTAATGA CTTCTCATTT ATATATAAAT AAGTCGAATA GGCCTTTGAC TGTAAGTAAA
TCAAACTTAG ATTTATTGAT TAATAATGAA CACCTTAATT CTTTAAGAGA AAAAATAATT
ATAACTGATG ACATCTCAGG AATGGCTTCC ATTCAGCAGT ACAGAAATGA TGATGGCATA
AGTAACTCAA GACTTGTTTT AAATGCGTTT AAAGCTGGGC ATGATCTGAT CTTAATTAGT
CATTTAGAGC ATCATAGTAA TAATAAATTT ACAGTTAGTG ATGTACGAGA ATCCATTGAT
GAACTAGAAA AGTATGTACG AACAAAAAAT GGACTGTCGC AGCTTAAAGT ATCGTTAGAA
AAAATACTGT TTTTAAAGAA AAAGGTTTCA TTGAAAAAGC AGGCAGTTAA TTTAGTAAAT
GCTGATTATT TAAAAGTTAT TGAAAGCAGA AATTTGGAGA TCTACAAAAA TGGAACTATT
AATGTAAGTA GCTCAGATGT AGATACCAAT ACAAATTTCA TGGACTTTGT GAACTCGGAA
AACAAGGTCT ATATAGTAGG GAATTCTAGG TATTTTGATA GCATACAACA TAATATCCCT
GCGAGTAAAA GTGTTGTTTA TACAGACATC AATGAACTAA AAAGAGGGAG CACTAAAGGG
GCTGTTTTAA TAAATAAAAT TGGATTAAAA CTTTCTAAGA CTGTTGCAGA TGGAAACTAC
CTTGTTTTTC TTGTTTCTTC TCTAGATTCG TACAATATCC TTGAATCATT GAGGTTACAT
AATACTGACC CTAGTAGAGT TTTAGTTTCA GTTCATGGGT CCCCGCTACC AATAAAAACG
GCTACTCTTC TTAACTATAA AATAGTGACG AACTTTGACT ATTCTCCTAG TTCTGCTTAC
CCACTTGGCT TAATTCTTAA TGGTCATTTA AATCCAGGTA ATCTTCATAA ATCACCATTG
GAATTAGGGA ATGGAGCGAT ATTTAAGTTA TCAGATCGAA TGGATATTGA ACATAGTGGT
AGTGATAGTG ACTTGACAAA GAAAATAAGT AAAGAGGGAG AAAACAATCT AAATGTTAAA
TTCTGGCTAT TAATTTTGCC TGTCAGTCTT ATTTTTGGTT CAAAAATCAT TTCAATGAGT
ATTTTTTCTT GTCATGCAAA GAAGTCTCCA GATCTTGATA GTAGACGTAC GTTTTGGAGA
GAGGCTTTGG TAAGTAAAGC TTATTTTAAA AGGAAAATTG CGATTTTGGC ATTACTGTTT
TTAGGGTTTA TTGCAATACC TATTTTTATA TCTTCACCCG GGGACTTTAG CTATATAGTA
ACATCTTCTG ATTATGTATT TGAAACTAGT ACGGTAAAAA ATATTGTAGA TATATTAATG
TATGTTGATA AGTTTCTTGT AAAATTGTAA
 
Protein sequence
MFRITQFALM YLLSLPLLAS SLTPLADDYI EKNGLRKSAA QLLVTGIVAD YNNFSYNKKT 
QELLNLNVGG IIINAYNVPV PHNTNNRNHA IQIIKDFTNS IRSVHVDGSD LLIAVDFESY
RYTSLRYPLI APPSALTLSA NNSTKSAFNA GDDAGRQLEN VGVNVILGPV LDKDSKLQGT
RNTNLMNRSF GSDSKVISVF ASEFIRGVSN NRVATFAKHF PGYGFVDSNP HNDDKVDINA
PRKTIIEDLK PFSNTSSLLS GVMTSHLYIN KSNRPLTVSK SNLDLLINNE HLNSLREKII
ITDDISGMAS IQQYRNDDGI SNSRLVLNAF KAGHDLILIS HLEHHSNNKF TVSDVRESID
ELEKYVRTKN GLSQLKVSLE KILFLKKKVS LKKQAVNLVN ADYLKVIESR NLEIYKNGTI
NVSSSDVDTN TNFMDFVNSE NKVYIVGNSR YFDSIQHNIP ASKSVVYTDI NELKRGSTKG
AVLINKIGLK LSKTVADGNY LVFLVSSLDS YNILESLRLH NTDPSRVLVS VHGSPLPIKT
ATLLNYKIVT NFDYSPSSAY PLGLILNGHL NPGNLHKSPL ELGNGAIFKL SDRMDIEHSG
SDSDLTKKIS KEGENNLNVK FWLLILPVSL IFGSKIISMS IFSCHAKKSP DLDSRRTFWR
EALVSKAYFK RKIAILALLF LGFIAIPIFI SSPGDFSYIV TSSDYVFETS TVKNIVDILM
YVDKFLVKL