| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_35 |
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| Symbol | hcp |
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| ID | 6961447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011311 |
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| Strand | + |
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| Start bp | 35695 |
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| End bp | 36213 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | secreted protein Hcp-2 (haemolysin co-regulated protein) |
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| Protein accession | YP_002261525 |
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| Protein GI | 215778385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CAGCGTATAT GTCTATAAAA GGCGAAGTTC AGGGCGATAT CACCAAAGAT
GCCTATTCAG CAGATTCTGT CGGTAATACC TGGCAGGAAG CACACATCGA TCAATTTTTA
GTTCAAGAGC TTGATCATGT ATTAACCGTT CCACGTGATC CACAAAGTGG CCAACCTACT
GGCCAACGTG TCCACCGTCC GGTGATCGTG ACTAAGCAAC AAGATCGATG CTCTCCATTG
TTATTTAATG CGTTAGTGTC TGGTGAGAAA TTACCGGAAT GTAGCATCAA TTTCTACCGT
ACTTCCACGT CTGGTAAGCA AGAGCATTAC TACACCATTA AACTTATCGA TGCATTATTG
GTTGATGTGC AAACTCGCAT GGCTCATTGC CAAGACGCCG CAACCTCAGA TCGCGTAACA
GAAGAAGTTC TGAAGTTTAC TTATCGTGCC ATTGAAGTAA CGCACGAAAC GTGTGGTACG
GCTGGCGATG ACGATTGGCG TAAACCTCGC GAAGCGTAA
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| Protein sequence | MPTPAYMSIK GEVQGDITKD AYSADSVGNT WQEAHIDQFL VQELDHVLTV PRDPQSGQPT
GQRVHRPVIV TKQQDRCSPL LFNALVSGEK LPECSINFYR TSTSGKQEHY YTIKLIDALL
VDVQTRMAHC QDAATSDRVT EEVLKFTYRA IEVTHETCGT AGDDDWRKPR EA
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