Gene VSAL_p840_28 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_28 
SymbolhupA 
ID6961442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand
Start bp31361 
End bp31636 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content42% 
IMG OID 
ProductDNA-binding protein HU-alpha 
Protein accessionYP_002261518 
Protein GI215778378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AAGACTTAGT ATCACACATT GCAGATATCG CGGATTTATC ACAACAAGAA 
GCAACAGCGG CGTTAAATGC CACCGTAGAA AGCATTACCA ATGCACTAAA AAACGGTGAA
GAAGTCACGT TAATTGGATT TGGCACATTT AAAGTCAACC CACGAGCGGC GCGTGAAGGT
CGTAATCCTA AAACAGGCGA TACCATTCAA ATTGCCGCAA GCAATATGCC GGCATTTAAA
GCCGGTAAAG CATTAAAAGA AGCAGTGAAT GAATAG
 
Protein sequence
MNKKDLVSHI ADIADLSQQE ATAALNATVE SITNALKNGE EVTLIGFGTF KVNPRAAREG 
RNPKTGDTIQ IAASNMPAFK AGKALKEAVN E