| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2894 |
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| Symbol | |
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| ID | 6878898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2875332 |
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| End bp | 2876708 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642790747 |
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| Product | General substrate transporter |
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| Protein accession | YP_002221285 |
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| Protein GI | 198284964 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.222038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAC AAAGTGGCCT GCCCACAGCA AACGTCCCCC CCGTGCCTGT TGCCGACAGG
CAACGCGGCC ACGCCCTGGG CGCCGCCATG CTGGGGATGC TGCTCGACGG CTACGACCTC
AGCATCATGG CGGTGGTGCT CCTCCCCCTG CACAGCGCCT GGCATCTGCA CGCGACCGAG
ACCGGCCCGC TCATGGCCAT GGCGTTACTC GGGTCTTTGC TGGGAGGCCT GGCGGGCGGC
GTCTTCACCG ACCGGTTCGG TCGCCGCAGG CTGCTGTTCC CAAATATATT CCTCTACGTC
ATCGGGGCCC TGGTCAGCGC CCTCAGCCCG GATGTCCCCG TGCTTTTTCT GGGCCGCTTT
CTGACCGGGC TGGCGATTGG CCTCGACTAT CCGCTGGTGG CCACCATCGT TGCGGAATAC
AGCCAGTCCA CCAATCGGGG AAACCGTTTC GCCCGGGTAA ATCTGGCCTG GTATGTCGGC
GCTCTGCTGT CCACCGGCAT CGGCTGGGCC CTGTTGTTTA CTGGCGACGA CTCCTGGCGC
TGGATGCTGG GGAGTGCAGT GGTCCCCGCA TGTGCCCTGC TCTGGTTGCG GCGCGGCCTG
CCGGAGTCGC CGCGCTGGCT GGCGCGCAAC GGGCATGTCG ATGCGGCCCG CGCGGCCTTG
GCCCGGCTGT CCCCAGAGAG CACACCCGCC GAACTCGGCG CACAGTTGGC GACTTTTCAG
GGGCATCGCC AGTCGTGGCG GGTGCTGCTG CGTAAAGTCT GGTTGCGTCG GCTGCTGCTC
AGCATCTTCC CCTGGTTCTG TCTGGATGTG GTGGGCCTGG GCATTGGCCT GTATTTTCCC
CTGGTGTTGC GCAGCAACGG CCTCGCCAGC AGTAACGGAG CTGCCGCCGC CATCAACGCC
GTCTTTCTGG TGATCTCCGC TCTGGGCATC CTCTATATTC TCTCCCGCCT CGACCGCTGG
GGCCGGATCC CCCTGCAAAG CGCCGGGTTC GGCATGATGT CTCTCGGCCT GGCGCTGTTC
GCGCTGTGCT CCTGGAATGG CTGGATTGCC GGGATTTATG GCGGTGCTGC GGTCTATTCC
CTGGGGGTGG GCATCGGTCC GGGAGTGACG GTTTTCGCGC TGGCCGTGGA AATTTTTCCG
ACGGAGTTGC GTGCGAGCGC GGCGGGGCTG GCGACGGGAC TTTCCCGCCT GGGAGCCTTC
GTTTCGGCGC TCTTATTTCC GATTTTCGAG AAAAGCTGGG GCATACCGCT GGTGCTGTTG
GTCATGGCCC TGGTGTCTCT GCTGGGAATG TTCACCACCC TCATCTACGG GGTGGAATCG
CGGCAGAAAA GCCTGGAAGA TTTGGAACGC GTGGATGCGC CGGTGGCAAC GCCCTGA
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| Protein sequence | MNRQSGLPTA NVPPVPVADR QRGHALGAAM LGMLLDGYDL SIMAVVLLPL HSAWHLHATE
TGPLMAMALL GSLLGGLAGG VFTDRFGRRR LLFPNIFLYV IGALVSALSP DVPVLFLGRF
LTGLAIGLDY PLVATIVAEY SQSTNRGNRF ARVNLAWYVG ALLSTGIGWA LLFTGDDSWR
WMLGSAVVPA CALLWLRRGL PESPRWLARN GHVDAARAAL ARLSPESTPA ELGAQLATFQ
GHRQSWRVLL RKVWLRRLLL SIFPWFCLDV VGLGIGLYFP LVLRSNGLAS SNGAAAAINA
VFLVISALGI LYILSRLDRW GRIPLQSAGF GMMSLGLALF ALCSWNGWIA GIYGGAAVYS
LGVGIGPGVT VFALAVEIFP TELRASAAGL ATGLSRLGAF VSALLFPIFE KSWGIPLVLL
VMALVSLLGM FTTLIYGVES RQKSLEDLER VDAPVATP
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