| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2881 |
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| Symbol | |
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| ID | 6878885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2862682 |
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| End bp | 2863782 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642790734 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_002221272 |
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| Protein GI | 198284951 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGA CCATCCTCGA CGCATTCCGG CAAAACGGCC TGAGCCGCCG CGCCTTCCTG
AAGTTCTGCG CCGCCACCGC CTCCCTGCTG ACCCTGCCCC CTGCCGCCGC CGCGGCCATG
GCGGAAAAGC TGGCGGGCAC TCTCCGCCCC ACGGTGATCT ACCTCTCCTA TCAGGAATGC
ACCGGCTGTC TGGAATCCAT GACCCGCTCC TTCTCGCCCA CCATCGAGCA CCTCATGTTC
AACAACATCT CCCTGGCCTT CAACGACACC CTTCAGGCCG CCGCCGGGGA GGCCGCCGAG
GCGGCCCGGA AGGAGGCCAT GCGCAAGGCC TGGGGCAAGT ACATCCTCAT CGTGGACGGG
GCCGTGCCCA TGGGAGCGGG CGGCGCCTAC TGCGTGGCCG CGGGCCAAAG CGCCGTCGAC
GACCTGCGCC ATGCCGCCCA GGGGGCGGCG GCCATCATCG CCGTGGGGAC TTGCGCCGCC
TTCGGCGGCG TGCCCTACGC GGCGCCCAAT CCAACCGGCG CGGTGCCGGT TTCCGAGGTC
ATCCGCGACC GCCCCATCAT CAACGTCTCT GGCTGTCCGC CCATTCCCGA GGTCATGACC
GGGGTCGTCG TCTATTACCT GAGCTTCGGG ATGCCCGCCC TGGACCGCCA GGGGCGGCCG
TTGACGTTTT ACGGCAACAG CATCCACGAC CGCTGTTACC GTCGGCCTTT CTATGATGAA
GGTCGTTTCG CCCACACCTT CGACGACGAG GGGGCGCGCA ACGGCTGGTG CCTCTATGAG
CTGGGCTGCA AAGGGCCGGT GACCTACAAC GCCTGCGCCA CCCTGAAATG GAACCAGGGG
ACCAGCTTTC CCATCCAGTC CGGCCACGGC TGCCTGGGCT GCTCCGAGCC GGACTTTTGG
GACAAGGGCG GATTTTACCG GCCTCTGCCC GCAGCCACCG GCCACTGGCC GCGCGGAGAG
GTTTTGGGCG GTGCGGCGCT AGGGGGAGCG GTGGTCGGGG TGGGAGCGGC GGCGCTCGCC
CGCTCCCGTC AGCACGCGGT CGCGAAAAGC GCCAAAGAGG CAAGCAGCCC GCCCCCAAGG
GAGGATTCCC ATGAGCACTG A
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| Protein sequence | MDETILDAFR QNGLSRRAFL KFCAATASLL TLPPAAAAAM AEKLAGTLRP TVIYLSYQEC
TGCLESMTRS FSPTIEHLMF NNISLAFNDT LQAAAGEAAE AARKEAMRKA WGKYILIVDG
AVPMGAGGAY CVAAGQSAVD DLRHAAQGAA AIIAVGTCAA FGGVPYAAPN PTGAVPVSEV
IRDRPIINVS GCPPIPEVMT GVVVYYLSFG MPALDRQGRP LTFYGNSIHD RCYRRPFYDE
GRFAHTFDDE GARNGWCLYE LGCKGPVTYN ACATLKWNQG TSFPIQSGHG CLGCSEPDFW
DKGGFYRPLP AATGHWPRGE VLGGAALGGA VVGVGAAALA RSRQHAVAKS AKEASSPPPR
EDSHEH
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