Gene Lferr_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2871 
Symbol 
ID6878875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2855210 
End bp2855764 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID642790724 
Producthypothetical protein 
Protein accessionYP_002221262 
Protein GI198284941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.39154e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAT TCAAGCATGT AGTATCGGGA TTGATGGTCG GAACGATGGC GCTGGCGGCA 
GTGCCTGCCT TTGCGGCAGT TGCAGAGACT CCGCCGGTCA TGAATGGTGG CCCCATGGGA
CCGGGCATGA TGCAAGGCCA TCCTTGTCCG GGGGGATGGC GGCATGGGCC CATGCGCAAG
GGTGGTTGGA TGCGGAACGC ACCCGTGCCC ATGCTGATGC CCATCGTCTG GCGGCATGCG
GTGGACCTCA AGCTGACCCC CGCGCAGGAA ACGGATCTGA AAAACTGGCG TGCCCAGCAG
CTAAAGGAAA TGCCCACCTG GCGTCAGAAT ATGCAGGTTC ACAACGCCGC GCTGCGTGAT
GCGCTTCTGA ACGGTGAATC GGGCAGTGCC ATCGTCCCCT TGCGGGAAGC GGTCCTCAAG
GATCATGCCA CGATGCTCGA ACACGGCATT CAGCAGGTGA ATTATCTCCA TAAGATACTG
ACGCCTGTGC AGTGGCAGAA AGCCACCGCG CTCTATAAGG AAATCGGGAG CAGGCGGGGA
CCCTGGGGCA AGTAA
 
Protein sequence
MLTFKHVVSG LMVGTMALAA VPAFAAVAET PPVMNGGPMG PGMMQGHPCP GGWRHGPMRK 
GGWMRNAPVP MLMPIVWRHA VDLKLTPAQE TDLKNWRAQQ LKEMPTWRQN MQVHNAALRD
ALLNGESGSA IVPLREAVLK DHATMLEHGI QQVNYLHKIL TPVQWQKATA LYKEIGSRRG
PWGK