Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2837 |
Symbol | |
ID | 6878841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2820792 |
End bp | 2821721 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790691 |
Product | ABC transporter related |
Protein accession | YP_002221229 |
Protein GI | 198284908 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.140237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCCAG CTTTTCTTGA ACTACGGGCG CTGCATAAGC GTTATGGCGG GCGCGAGGTG CTGCGCGGGG TAGACCTCGC CGTCGCCGCC GGGGAATGCT TCGCCCTGGT CGGCCCCAAC GGGGCGGGTA AAAGCACTAC GGTACGGGCG ATCCAGGGGC TGACGCCAAC CGATGGCGGA GAGGTTCGTA TCGATGGCCG GACGCTCGCA GAAATGGGAC GCACGGCGCG GACGGGCATG GGGGTGGTGC CCCAGACGGA TAACCTGGAC CCCGATTTTA CCGTACAGGA AAACCTCTGG ACCTACGGCC GCTACTTCGG CCTGCCGAAA GCGCTGATCC GCCAGCGCAG CGCCGAGTTA CTGGAGTTCA TGGCCCTCAG CGGCTACGCC ACTCAGCCGA TTCATGCCCT GTCCGGTGGT ATGCAGCGCC GCCTGACCAT CGCCCGCGCT CTGATCAACG CCCCCAAGTT GTTGCTGCTG GACGAGCCCA CCACGGGACT CGACCCTCAG GCCCGTCATC TCATCTGGCA GCGTCTGCGC GAATTGCGGC GACAGGGCAC CACCCTGTTG CTGACCACGC ATTATATGGA CGAAGCGGAA CGTCTGGCGG ATCGGGTCGG GATCATCGAT CATGGCCGGA TTCTGGCGGA AGACAGTCCA CGTGGCTTGA TCGCCACCCA TATCCCCGGG GGTGTCGTCG AATTGCGCCG GGTGGATGGT GATCTGCCGG ACCCGCAGGA TCTGCATCGC CAGTGGGTGA GCTTCAGTGA GCGCGTGGGC GACACCCTGA TTTGCTACGG GACGAATCTG ACCCCGCTGC TGACGCACTT TGGCGATGAT CCGGCCTATC GCTGGATACA GCGTCCCGCC AGCCTGGAGG ATGTGTTCCT GCGCCTGACG GGACGCGATC TGCGGGAGGA AACCGAATAA
|
Protein sequence | MNPAFLELRA LHKRYGGREV LRGVDLAVAA GECFALVGPN GAGKSTTVRA IQGLTPTDGG EVRIDGRTLA EMGRTARTGM GVVPQTDNLD PDFTVQENLW TYGRYFGLPK ALIRQRSAEL LEFMALSGYA TQPIHALSGG MQRRLTIARA LINAPKLLLL DEPTTGLDPQ ARHLIWQRLR ELRRQGTTLL LTTHYMDEAE RLADRVGIID HGRILAEDSP RGLIATHIPG GVVELRRVDG DLPDPQDLHR QWVSFSERVG DTLICYGTNL TPLLTHFGDD PAYRWIQRPA SLEDVFLRLT GRDLREETE
|
| |