| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2797 |
|---|
| Symbol | |
|---|
| ID | 6878800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2779425 |
|---|
| End bp | 2780744 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002221190 |
|---|
| Protein GI | 198284869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCT CAACGCTCAC ATCACATCAG CAAGCCAGCC TGCACCGTAT TGAGGTGCGG
CCCATCCTGC CCACAGAGCG GGAACGCTGG AATACCCTGA TGCAAGCGCA TCATTATCGC
GGCTTCCGCA CAATGGCGGG ACGCACCCTG CGCTACGTGG CCACGCTGGA TGACCGCTGG
GTAGCGCTCC TCGGCTGGCA GGCCGCCGCT TACCAGTGTC AGGCGCGGGA GCAGTGGATC
GGCTGGTCCT GGGTCTTGCG CCGCCAGCGC CTGCACCTCA TCGCCAATAA TGCCCGCTTT
CTGATCCTGC CGAGGGAGTC CTTTCCCAAC CTGGCTTCCC GTATTCTTTC CCTGAACCTC
CGCCGACTTT CTGCTGACTG GCAGTCGGTC TACGGTCACC CCATCGTGCT GGCCGAGACC
TTCGTGGAAT CGCCTCGTTT TACTGGCGCC TGCTACCGGG CCGCAAACTG GGTGGACGTC
GGCTGGACCA AGGGCTTTGC CCGCCGTCCC GGCGCAGGCT ATGTCTACCA CGGTCAGCCC
AAACGGCTTC TGCTCTATCC CCTTCACCCC CAGGCGCGTA TCTGGCTTGC CCAGCCGCAG
CCACAATCCG AATGGACGAA AACCCCTATG CAAACCGTCA CCCTGAGCGA TGCGCAAATG
GAAGGCTTGC GCCAAATTTT CTTTCGCCTG CCCGATGCCC GCAGCCGTCT GGGCAAGCAG
CATCCTCTCC CGGCCATTCT GACCATAGCC GTGGCCGCCG TCCTCACCCA GGCCCAAAGC
TATATCGCGA TGGCCGAGTG GGCCGCCCGG CTGACCCAAG CGCAACTGAA GCGTATCCGC
GCCCGATTCA ATCCCAGGAC GCAACGCTAT GTGGCGCCTT CCGAACCGAC CCTGCGTCGC
GTCCTGCAAG GCGCCAACGT CACGGCACTG GATGCCGCTA TCGGTGCCTG GCTGCTGGGT
ATCGCCGGAT TTGAAGCCGT GGCTGTCGAT GGCAAAGTGC TCAAAGGCGC GGTTCGGGAA
GATGGGTCCC AGGTCCATCT CCTCAGCGCT TTCATGCACG GCCAGGGAGC CACCATTGCA
CAAAAAGAAA TCGCCCGGAA AACCAACGAA ATCCCGGAGC TGCGCAGCCT GCTCAAAGAC
GTCGACATCC AGGACAAGGT CGTCACCGCC GATGCTCTGC ATACCCAGCG AAAGACCGCT
CGATTCCTCG TTGAAGACAA AAAGGCCGAT TATCTCTTCA CCGCCGTCAA AGGCAATCAG
CGAAAACTCC GCAACAGCCT GATATGCCTC CCTTGGGGCG ATTTCCCCCC TCAGCGCTGA
|
|---|
| Protein sequence | MEASTLTSHQ QASLHRIEVR PILPTERERW NTLMQAHHYR GFRTMAGRTL RYVATLDDRW
VALLGWQAAA YQCQAREQWI GWSWVLRRQR LHLIANNARF LILPRESFPN LASRILSLNL
RRLSADWQSV YGHPIVLAET FVESPRFTGA CYRAANWVDV GWTKGFARRP GAGYVYHGQP
KRLLLYPLHP QARIWLAQPQ PQSEWTKTPM QTVTLSDAQM EGLRQIFFRL PDARSRLGKQ
HPLPAILTIA VAAVLTQAQS YIAMAEWAAR LTQAQLKRIR ARFNPRTQRY VAPSEPTLRR
VLQGANVTAL DAAIGAWLLG IAGFEAVAVD GKVLKGAVRE DGSQVHLLSA FMHGQGATIA
QKEIARKTNE IPELRSLLKD VDIQDKVVTA DALHTQRKTA RFLVEDKKAD YLFTAVKGNQ
RKLRNSLICL PWGDFPPQR
|
|---|
| |