Gene Lferr_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2785 
Symbol 
ID6878788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2763314 
End bp2764231 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content54% 
IMG OID642790639 
Productrestriction endonuclease 
Protein accessionYP_002221178 
Protein GI198284857 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATAC CAGACTTTCA AACGCTCATG CTTCCCGTCC TGAAGTCTGC CATTCAGGGG 
GAAAGGCGCA TTTCCGATGT GGTTGAACAG TTGGCTGAAG ATTTTTCGCT CACGCAACTG
GAAAGAGACC AATTATTGCC CTCTGGAAGG CAAACCCAGT TTGCCAACCG CGTGAACTGG
GCAAAATCCT ACTTGAATAA GGCTGGCCTC GTGGTGAATA CCCAGCGCGG TCATTTCTCT
CTGACGGAAC GTGGCCGGAA GGTGCTGGCT CAGTCTCCAG AGAAGATTGA CCGAAAATTC
TTGGCTCAGT TCAACGAATT TCAGGACTTC GTCAGCATTC ACCACCATCA TGAAGACCCG
ACTCAAGAGG AGCGGCAGGA GCCGACCCAA GAATTGGCAC CCGATGAGCT GATGCGGCAG
GCTTACCACG AATTGGAATC CACGCTCGCA GAGGAACTAT TGCAGCGCGT CCGCTCTGGT
TCTCCTGCCT TCTTTGAGGC TCTGGTAATC CGGCTTTTGC TGGCCATGGG CTACGGCGGT
CAATCCGCCG AGGACGTGGA GAAAGCGCTG GTCGGCGGCA TTGGAGACGG CGGCATTGAC
GGAATCATTG ACCAGGATCC GTTGGGTCTG GACCGAATCT ATATACAAGC CAAGCGCTAT
GGTGAAGGCA ATACGGTGGG CGCTGGAGCC ATTCGGGATT TCTTTGGCAG CCTGGACCGG
TTCAAGGCCA GTAAAGGGCT GTTCATTACC ACGTCAGATT TTACCCAGCA GGCACGAGAA
ACGGCAGAAA TGCTGAGCAA AAGGATTGTA CTGATTAACG GCAAGCAACT TTCCAGGCTG
ATGGTCCGTC ATGGGGTAGG GTGCCGCGTG GAAGAGACCC TGGAAATCCG AAGGCTGGAT
GAGGAGTTTT TTGGGTAG
 
Protein sequence
MPIPDFQTLM LPVLKSAIQG ERRISDVVEQ LAEDFSLTQL ERDQLLPSGR QTQFANRVNW 
AKSYLNKAGL VVNTQRGHFS LTERGRKVLA QSPEKIDRKF LAQFNEFQDF VSIHHHHEDP
TQEERQEPTQ ELAPDELMRQ AYHELESTLA EELLQRVRSG SPAFFEALVI RLLLAMGYGG
QSAEDVEKAL VGGIGDGGID GIIDQDPLGL DRIYIQAKRY GEGNTVGAGA IRDFFGSLDR
FKASKGLFIT TSDFTQQARE TAEMLSKRIV LINGKQLSRL MVRHGVGCRV EETLEIRRLD
EEFFG