Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2720 |
Symbol | |
ID | 6878724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2707224 |
End bp | 2708990 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790580 |
Product | flavodoxin/nitric oxide synthase |
Protein accession | YP_002221119 |
Protein GI | 198284798 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.893392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000726752 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGAATTGA TCCGACAATC AGACTTTCTA CTGGACCCGC GAAAGCAGGA GGACCTGCGA CGTTTCGCGG AGGGCATGAC TCGCGAACAA TTGCTGTGGT CCAGCGGCTA TTTGACGGGT TTTGGGGAAA GTGCGCCTGC CTCAAAAATA CAAGAAGACA TTGGAGAAAA GATCACCATA CTGTTTGGCA CGGAAACCGG TAATGCCAAG CGGTTGGCGG AACTTTTGGC GGCCAGGGCC CAGGCGATGG GTGTGCAAAC CAGCATTCAG GACATGTTGA CGTATGGTCG TGCACAATTG CGCCGGGATC GCGTCATCGT GCTTATTGTC AGTACGCATG GGGATGGTGA GCCACCAGAC AGTGCCCGCA TGCTTTTGGC TTCACTGACC GATGGGCCGG TTCCGGATCT GCACGGCAGC CGCTTTGCCA TATTGGCATT GGGTGATGCC AGTTATCCAA AGTTTTGCCA GGCGGGAAAA GCGTTCGATA TTGCCCTCGC TTCCGCCGGC GCCGAGCGCC TTCTCCCCCG AGTCGATTGT GACGTCGATT ACGAAAGGGA TGCCATGTAT TGGATGGAGC AGGTCCTGGG GGCACTCACC ACCGGCAAGT CCTCTCCGGC AGTACCGTTT CCGGCTCCCG TTCCGAAACA GGGATACTCG AGCCATGCCA CTTTCCCCGC CGTTCTGCTG GGCAAGGTGA ATCTCTCCGG CCGCGGGTCG GACAGGGAAG TCTGGCATCT CGAACTGGAC CTCGACGGAT CTGGCCTTCA CTATGCACCA GGCGATATCG TGTCCGTTGC TCCGAGCAAT CCGCCCCAAC TCGTAGAGGA GCTACTCGAC CGGCTCGAAC TGGACCACAA GGCCTCCGTA CGGACCAGAC AGGGTGAAAT GCCGCTGGTG GAGGCCCTCG CCGCGCACTA TGAAATCACC AGAATCACAT GGCCCTTTCT GGAGCGTTAC GCGCGCCTGA GTGACGCGAA GGCTTTGCAA AGCGCGATTG CCGGGCGAGA TGTCAACGGC CTCGACACTT GGACAGACGG CCGGGAAGTC ATCGACATCG TCGGGCAATA CCCCGTCAAG GGGCTTAGTG CGCAATCCTT CGCCGACTGC CTGCGGCCCT TGCCGCCGCG GCGGTATTCC ATCGCCTCCA GCCTTCTCGC CGTTCCGGGC GAGGTCCACC TGACGGTCGC CGCCATCCGC TACAGCAGCC ACGGACGGGA GCGTCTGGGG GTTGCCTCGA CATTTCTGGC GGATCGTGTC GCCATCGGCC GGCCTGTACC CATATTTATC GAACCCAATG CCGAATTCCG GCTACCCGAA GATTCCGGAC AGGCGATGAT CATGATCGGG GCCGGAACCG GGGTGGCCCC CTTTCGTTCC TTCCTGCAGG AACGGGAGGC GCTGGGTGCT GCCGGAAATA ACTGGCTTTT CTTCGGGGAC CGTCACTTCA GCACCGATTT TCTATACCAG CGGGAGTGGC TGCGCTGGCT CAGGGATGGG CGCCTCACCC GACTCGACGT TGCCTTCTCC CGCGACCAGG AACGCAAGAT ATACGTCCAG GACCGTTTGC GGGAGCGTGC CGGTGACGTA TTCGCATGGC TTGAAGAAGG TGCCGCCGTG TATGTTTGCG GGGCCGAAGC GATGGGCAGG GCGGTACATC AATCCCTGGT GGATATCGTT CAGTCGGCCG GGCGCACGCA GGTTCAGGCC GAGGAATATA TTCTGGAATT GAAACAGACG GGGAGATATC ACCGAGATGT CTATTAA
|
Protein sequence | MELIRQSDFL LDPRKQEDLR RFAEGMTREQ LLWSSGYLTG FGESAPASKI QEDIGEKITI LFGTETGNAK RLAELLAARA QAMGVQTSIQ DMLTYGRAQL RRDRVIVLIV STHGDGEPPD SARMLLASLT DGPVPDLHGS RFAILALGDA SYPKFCQAGK AFDIALASAG AERLLPRVDC DVDYERDAMY WMEQVLGALT TGKSSPAVPF PAPVPKQGYS SHATFPAVLL GKVNLSGRGS DREVWHLELD LDGSGLHYAP GDIVSVAPSN PPQLVEELLD RLELDHKASV RTRQGEMPLV EALAAHYEIT RITWPFLERY ARLSDAKALQ SAIAGRDVNG LDTWTDGREV IDIVGQYPVK GLSAQSFADC LRPLPPRRYS IASSLLAVPG EVHLTVAAIR YSSHGRERLG VASTFLADRV AIGRPVPIFI EPNAEFRLPE DSGQAMIMIG AGTGVAPFRS FLQEREALGA AGNNWLFFGD RHFSTDFLYQ REWLRWLRDG RLTRLDVAFS RDQERKIYVQ DRLRERAGDV FAWLEEGAAV YVCGAEAMGR AVHQSLVDIV QSAGRTQVQA EEYILELKQT GRYHRDVY
|
| |