| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2717 |
|---|
| Symbol | |
|---|
| ID | 6878721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2705229 |
|---|
| End bp | 2705855 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642790577 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002221116 |
|---|
| Protein GI | 198284795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000347698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTG TTATGGCGGA AACCTCCCAC GAGGAGGAGC TGGCCAAGGC CCGGGAGGCC
CTGGGGCATC TGGTGGAAAA CGGGGATCTG GAGCGTATCG TGCATCTGGC GCGTCTGGTC
GGTGCCGCGC AGGATTCCAT GAGCGACGAA ATGGTCGGAC GGATGGCGGG TCTGGCCAGC
GACGGCCTCG ACCTGCTGGA CCGGGTCCAT CGCAGTCAGG TCGTCCATGC CCTGCCCGCC
ATCTCCGCGC TGGTGGAGAA TGGGGATCTG GAGCGTATCG TGCACCTGGC GCGTCTGGTC
GGTGCCGCGC AGGATTCCAT GAGCGACGAA ATCGTGACGC GCTTGGCGGG CATGGCCAGC
AAGGCCCTGT GCCTGCTCGA CCAGGCTACC CGCACCGGCG TCATGGAACG GATGGTGACG
GTGGCGGAAA AGATGGATCA GGAGCATATC CTGACCGATT TCCTCCGCTG CCTGGCCGGG
GCTACGGAAG AAGCGGCCCA TGCCCCCCCT CCCAAAGGCG GCCTCACCGG ACTCTGGGAA
CTGATAAAAC AACCGGAAAC CCAGCAAACC ATCCAGTTCC TCATGCTCCT CGGCAAACAC
TTCCGATCCT GCCGACTCAA ACACTGA
|
|---|
| Protein sequence | MTAVMAETSH EEELAKAREA LGHLVENGDL ERIVHLARLV GAAQDSMSDE MVGRMAGLAS
DGLDLLDRVH RSQVVHALPA ISALVENGDL ERIVHLARLV GAAQDSMSDE IVTRLAGMAS
KALCLLDQAT RTGVMERMVT VAEKMDQEHI LTDFLRCLAG ATEEAAHAPP PKGGLTGLWE
LIKQPETQQT IQFLMLLGKH FRSCRLKH
|
|---|
| |