Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2711 |
Symbol | |
ID | 6878715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2699076 |
End bp | 2700263 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642790571 |
Product | cytochrome c-type biogenesis protein CcsB |
Protein accession | YP_002221110 |
Protein GI | 198284789 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0072374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000373166 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAGCT CACAAGCAGA TGAGTCGCTC GCGCTTACGA AAATGGAAGC CGAGGGACAT TGGGTGAATC GTATCAGCAA GCAGGACCTG CTGTGGTTCG CGGGGCTTAC GGTTGCTGCT GGTGTTTTGG TGGACGTTTT TAACAGCCAG TTTTGGTTTT GGCAATATGT GGTTCTTGCT ACCTGGTATG TCACGTTGGT TGCAGTCGGT ATTCACTGGC GCGCCTTCCA GGTGGCATTC TTAACGGTGG TCAGCGCCGC TCTTCTGGGT GTTTGGTTGT ATAGCATCGG CCAAACACCT GCTAACGATG TCATTTTATG TTACGTATTA CAAGGCTATG CCGGTGTTAT GTGGATGATC GGTTTTCTTT TGGCCGCCAC CAGTGCTTAT ATTATCTACC TGTTTACCCT CTCGGAAAAA GTGGGGCGCT TGGCAACGGG GCTGACATGG GTCGGTGTTA TTATGGGCTT CATCGGCCTT GGTGTCCGTT GGCGCGAAAC CTATATCGGG CATCCTGATT GGGGACATGT TCCGGTGACC AATCTTTGGG AGGTGATGGT GGTATTTTGC GCAGCCACTG CCCTCTTTTA CCTTTATTAT GAGTCCCGCT TCAAATCCAG ATCGCTAGGG GCTTTTGTCA TGCCCTTGGT TGCGGCGGCT GCAGGGTTCC TTATCTGGCT GACCTTTGTC CAGCATATGG ATCGTATAGC ACCGATAATT CCTGCGCTAC AAAGCTTCTG GATGAAATTG CACGTACCGA TGATGTTTGT GGCATATGCC AACTTCACCA TCGCCAGTCT GGTTGGTCTC GCTTATCTTC TCGGCGACCG CTCGCGTAGA AGTGGTGGCG GCGGCGTTCT CGCGCGGGCT CTTCCCAGCG GGGAGGTTAT GGATAACATG ATGTCCAAGG CAATTGCCTT GGGATTTCTG TTGTTTACGA TCGCCACTAT CCTCGGTGCT GTATGGGCCG CCAAGGCATG GGGCGGATTT TGGTCGTGGG ATCCCAAGGA GACGTGGGCA CTTATAGTTT GGTTGAATTA TGCCGGATAC CTTCATGCCC GTACAAGTAA AGGATGGCGG GGCAAGCAGA TGGCGTGGTG GTCCTTTATG AGTCTGTGGG TTGTGACATT CTGCTTTCTG GGCGTCAACC TCTTTCTATC CGGGTTGCAT TCTTACGGGA AGCTCTGA
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Protein sequence | MASSQADESL ALTKMEAEGH WVNRISKQDL LWFAGLTVAA GVLVDVFNSQ FWFWQYVVLA TWYVTLVAVG IHWRAFQVAF LTVVSAALLG VWLYSIGQTP ANDVILCYVL QGYAGVMWMI GFLLAATSAY IIYLFTLSEK VGRLATGLTW VGVIMGFIGL GVRWRETYIG HPDWGHVPVT NLWEVMVVFC AATALFYLYY ESRFKSRSLG AFVMPLVAAA AGFLIWLTFV QHMDRIAPII PALQSFWMKL HVPMMFVAYA NFTIASLVGL AYLLGDRSRR SGGGGVLARA LPSGEVMDNM MSKAIALGFL LFTIATILGA VWAAKAWGGF WSWDPKETWA LIVWLNYAGY LHARTSKGWR GKQMAWWSFM SLWVVTFCFL GVNLFLSGLH SYGKL
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