| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2700 |
|---|
| Symbol | |
|---|
| ID | 6878704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2687745 |
|---|
| End bp | 2688677 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790561 |
|---|
| Product | chaperone DnaJ domain protein |
|---|
| Protein accession | YP_002221100 |
|---|
| Protein GI | 198284779 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.062215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000117807 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGAATACA AGGACTACTA CAAAATTCTG GGAGTCGAAC GCAGCGCCGA TGCCGATGCC
ATCAAAGCGT CTTATCGCAA AATGGCGCGC AAATATCACC CGGATGTGAG TAAGGAAAGG
GATGCGGAGG AACGCTTCAA GGACCTCCAG GAAGCCTACG AGGTGCTCAA GGACCCGGAG
AAACGCGCCG CCTATGACCA GTTGGGCAGC AACTGGCGCG CCGGCCAGGA GTTCCGGCCC
CCGCCCGGTT GGGGTCAGGC GGCCGGGGGT GGCTTTGGCG GGGGTGGCGG CGGGTTCAGC
GACTTTTTCG AGTCCATATT CCGCCAGCAG GGTGGTGGCT TCGGAAGCGG CGGGGCGAGC
GGATTCCGCA GCCAGGGCGA AGATAGCGAG GCGACGATCC GCGTCAGCCT AGAGGATGCG
GCCCACGGCG CCCAACGTGA GATCAGCCTG GAAGTACCCA CCATGGGTCC CGATGGCCGT
ATGCGCCGTG AAGCGCGGCG CCTGACCGTC AAGATCCCCA AAGGCATCCG CGAAGGGCAG
CGACTGCGTA TGGCGGGGCA GGGTGCGCCG GGTATGGGTG GCGGTCCCAA TGGGGATCTG
TACCTGCACA TCCAGTTTCT GCCACACCCC AGATTTCGGA TAGAGGGCAG TGATTTATAT
CATGACCTGC ACATCACTCC GTGGGAGGCG GTGCTCGGCG CCAGCGTCGA AGTTCCCACC
CTGGATGGCG ACGTGCGCAT GAAGATTCCG GCCGGTAGCA CCAGCGGGCA GAAGCTGCGA
CTCAGTCAAA AGGGATTGCC GGGCGCCGGC AGTAAACCAC CTGGAGATTT GTATGCCGTA
ATCCAGATTG TCGTCCCCAA AAAAATCAGC GAACCGGAAA AAGCCCTGTG GAACCAACTG
GCAGAGATGT CCGACTTCCA TCCCCGCCGC TGA
|
|---|
| Protein sequence | MEYKDYYKIL GVERSADADA IKASYRKMAR KYHPDVSKER DAEERFKDLQ EAYEVLKDPE
KRAAYDQLGS NWRAGQEFRP PPGWGQAAGG GFGGGGGGFS DFFESIFRQQ GGGFGSGGAS
GFRSQGEDSE ATIRVSLEDA AHGAQREISL EVPTMGPDGR MRREARRLTV KIPKGIREGQ
RLRMAGQGAP GMGGGPNGDL YLHIQFLPHP RFRIEGSDLY HDLHITPWEA VLGASVEVPT
LDGDVRMKIP AGSTSGQKLR LSQKGLPGAG SKPPGDLYAV IQIVVPKKIS EPEKALWNQL
AEMSDFHPRR
|
|---|
| |