Gene Lferr_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2655 
Symbol 
ID6878654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2635810 
End bp2636571 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID642790512 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_002221056 
Protein GI198284735 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCA GTCGCGTCAT ACCCTGCCTC GATATCGACC ATGGGCGCGT GGTGAAAGGC 
GTTCAGTTCG TCGCCCTGCG CGATGCCGGT GATCCGGTGG AAGTCGCCAA ACGCTACAAC
GACGAGGGTG CCGACGAAAT CACCTTTCTG GACATCTCCG CCAGTTATGA AGAGCGCGGC
ACCCTGGCCG ATATGGTGTC CGCCGTGGCG GCGCAGGTCT TTATCCCACT GACCGTAGGT
GGTGGCGTGC GTTGCGTCGA AGATATCCGC ACCCTGCTCC TCGCCGGTGC CGACAAGGTC
AGCATCAACA GCGCCGCCGT GAATGACCCG GAACTGGTAC GCGCCGCCGC CCGGCGTTTC
GGCAACTCCT GCATCGTCGT CGCCATCGAC GCCAAGCGGG TAGAGGATCA CTGGGAGGTC
TTCACCCATG GCGGCCGGCG CGGTACCGGT CTGGACGCGG TGGCCTGGGC GCAGCGTATG
GCGGCATATG GTGCCGGCGA AATCTTGCTC ACCAGCATGG ACCGCGACGG AACGGGCATC
GGTTTCGACC TCGCCCTCAC CCGCGCCATC AGCGACGCCG TACCAGTACC CGTGATCGCC
TCCGGTGGGG TGGGAGAGAT CCGGCACTTT GTCGAAGGCA TCCAGCAGGG GCGTGCTGAT
GCGGTGTTGG CCGCCAGCGT CTTCCACTTC GGCCAGTTTC GCATCTCCGA GGTCAAGGCA
CGGATGGCTG CCGCGGGGAT TCCGGTGCGC ACAACCCGCT AA
 
Protein sequence
MLASRVIPCL DIDHGRVVKG VQFVALRDAG DPVEVAKRYN DEGADEITFL DISASYEERG 
TLADMVSAVA AQVFIPLTVG GGVRCVEDIR TLLLAGADKV SINSAAVNDP ELVRAAARRF
GNSCIVVAID AKRVEDHWEV FTHGGRRGTG LDAVAWAQRM AAYGAGEILL TSMDRDGTGI
GFDLALTRAI SDAVPVPVIA SGGVGEIRHF VEGIQQGRAD AVLAASVFHF GQFRISEVKA
RMAAAGIPVR TTR