| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2634 |
|---|
| Symbol | |
|---|
| ID | 6878633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2618514 |
|---|
| End bp | 2619239 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642790491 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002221035 |
|---|
| Protein GI | 198284714 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.445237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC TGCTCCAGGC GCAATCGCTG TTCAAGTCGT ACCGGCGGCG CGTCGTGGTG
CGCGATGTCT CGGTGCAGGT GGCCACTGGC GAAGTGGTAG GGCTGCTCGG CCCCAACGGG
GCAGGCAAGA CCACGACCTT TTACATGATG GTCGGGCTGG TGCGTCCCGA TCGCGGTCAT
ATTTTTTTGC AGCAGCGCGA TATTACCGCG CTGCCCATGC ATGAACGCGC CCGTATGGGT
CTGGGTTATC TCCCTCAGGA ACCTTCCGTT TTCCGCCAGA TGAGCGCCGC CGATAACGTC
CTTGCGGTGC TGGAAACTTT GCCCCTGAGC CCCGTCGAGC GGCAGGAGCG TCAGGAACAA
CTGCTCAGTG AGTTACATCT TCATGCATTG CGTGACACCA AAGGACACAG CCTTTCCGGT
GGTGAGCGGC GGCGTGTGGA AATTGCGCGG GCGCTGGCCA TGAGTCCGCG TTTTATCCTG
CTCGATGAGC CATTCGCTGG TATCGATCCT ATTTCCGTGC TGGAAATTCA ACGCCTGATC
CGGGACCTGC GCGCGCGCGG CATCGGGGTT CTGATAACCG ATCATAACGT GCGCGAGACG
TTAGGCATTT GCGAGCGCGC CTATATACTG CATGATGGTA AAGTGCTGAC GGCGGGCAGC
CCGCAGGAAA TCGTTGATGA TCCCATGGTG CGGCAGGTTT ACCTGGGAGA TCAGTTTCAA
ATCTGA
|
|---|
| Protein sequence | MSELLQAQSL FKSYRRRVVV RDVSVQVATG EVVGLLGPNG AGKTTTFYMM VGLVRPDRGH
IFLQQRDITA LPMHERARMG LGYLPQEPSV FRQMSAADNV LAVLETLPLS PVERQERQEQ
LLSELHLHAL RDTKGHSLSG GERRRVEIAR ALAMSPRFIL LDEPFAGIDP ISVLEIQRLI
RDLRARGIGV LITDHNVRET LGICERAYIL HDGKVLTAGS PQEIVDDPMV RQVYLGDQFQ
I
|
|---|
| |