Gene Lferr_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2562 
Symbol 
ID6878561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2534893 
End bp2535249 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID642790419 
Productiojap-like protein 
Protein accessionYP_002220963 
Protein GI198284642 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.989694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGACAG CAGAAACCCT TCGCGACCTG GCCATCTCCG TTCTGGATGA ACACAAGGCG 
CTCGACATCA AGAGCATCGA CGTCCGCAAA CAGACCGACA TCACCGACTA TCTCATCATC
GCCTCCGGCA CCTCCGACCG CCACTTGCGG GCGCTGGCCG ACGCGGTGAT GGCGCGTATG
CGCGAGGAAG GCGTAAAACC CATAGGCAAG GAAGGCCTCA CCGTCGGCGA CTGGGTGCTG
GTCGACCTCG GCGATGTGGT CGTCCATGTG ATGCGTCCGG AAGTGCGCGA TTTTTACCAA
CTGGAGCGGC TCTGGGGAGA ACTTCCCCAG ATACGTAGCC AAAGCGAGGG GCGCTGA
 
Protein sequence
MATAETLRDL AISVLDEHKA LDIKSIDVRK QTDITDYLII ASGTSDRHLR ALADAVMARM 
REEGVKPIGK EGLTVGDWVL VDLGDVVVHV MRPEVRDFYQ LERLWGELPQ IRSQSEGR