Gene Lferr_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2561 
Symbol 
ID6878560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2534213 
End bp2534869 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID642790418 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_002220962 
Protein GI198284641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.835513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGTT CCACACACGA TGATCTGGTC ATCCTCGGCG GCACCTTCGA CCCCATCCAT 
TACGGGCACC TGCGCGCCGT GGAGGAGGTG CGCCAGGCCC TCGCCATCGC GCAGGCGATG
CTGATTCCGG CGGGGCACCC GCCCCACCGC AAAAGCCCCT GGGCCGACGC CCGCCACCGT
CTGGCCATGA CCCGCATCGC CGTCGCGCAC CATCCGCAAT TCACGGTCAG TTCCTGGGAA
GTAGAGCGGG AGGGGCCGTC CTACACCGTG GATACCCTCA CCGCCCTGCG TCAGCAACGC
CCGGATGCGG TACTCGCCAT GGTCATCGGC ATGGATGCCT TTCTGCGCTT CGACACCTGG
CACCACTGGC AGCACATTCT GGACCTCACC CACCTCGTCG TTACCGGGCG CCCGGGCTGG
CCTGCCGCCG AATTACCGGA AGCCCTGCGC CAGGCCCTCT ATCAGCGCCG TTGCGAAGAT
GTCGACGCCC TGCGCCAGAC GCCCGCCGGC TGTATCCTGT TTCATACGGT CACCGCCCTG
GAAATCTCCG CCAGCAATAT CCGCAGCCTG CTCGCCGGTC ATCAGAGCCC GCGCTTTCTG
TTACCGGACG AGGTATTGGA TTATATTGAT GCCGAAGGGC TCTATCAGAG CCCATAG
 
Protein sequence
MHSSTHDDLV ILGGTFDPIH YGHLRAVEEV RQALAIAQAM LIPAGHPPHR KSPWADARHR 
LAMTRIAVAH HPQFTVSSWE VEREGPSYTV DTLTALRQQR PDAVLAMVIG MDAFLRFDTW
HHWQHILDLT HLVVTGRPGW PAAELPEALR QALYQRRCED VDALRQTPAG CILFHTVTAL
EISASNIRSL LAGHQSPRFL LPDEVLDYID AEGLYQSP