Gene Lferr_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2560 
Symbol 
ID6878559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2533245 
End bp2534153 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID642790417 
Producthypothetical protein 
Protein accessionYP_002220961 
Protein GI198284640 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.883741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG AAGATCGGAG CGGCGGTAAA AAGGCGCGCG TAGGATTCGG AAAGTCCGCA 
GGGGCGGCTT TGGGCACATT GTTCTTCGGT CCGCTGCTGC TCGCCGGGTG CGCCACCACC
CCGGATCTCC AATCCGCGGA GCATCTGGTG CAAGACAACT TCCACGGCAA GGCCCGTGTG
GTGAAGGTCT TTCCGGGCCC CACCCAAAAA CTCACCGGCA TCATCGCCGA AAACAGCCAG
CATCAGCAGG GGATACTCTG GATGTTGTCC AATCGCTACC TCCTGCTCGG CCCGGTGGTG
AACGATAAGG GCCAGGATAT CACCCGGGCG GCCACGGAGA AGTATCTGCC CCAACCCCGA
AAGGTCCCCG CCGGACAGAT CGCCCCGGCA GCCATGAAGG CACCGGGCTT CACCATCGGT
CACGCGGGGC CACTCATGGT GGTGTTTGCC GACCCCAACT GCATCTACTG CCACCTGCTC
TGGGAGGCAT TGCAAAAACC CGTCGCCGAC GGTCAACTTC GAGTAAAGCT GATCCCCGTC
GGTTTCCTGA AAGATTCCAG CGCCGCCAAG GCAGCCACGA TTCTCGCCGC CCCCGACCCG
GCGGCGGCAT GGGCGGAGAA CGAGAAGGGG TTTGATAAAA GCACCGAGGA GGGTGGCACC
CGACCCCTGG CGCAGATTCC CGCCGAAGAC ATGAAGGCGG TCCATGCCAA CACCGCCCTG
CTTCAGTCCA GCGGTGAAGA AGCGACGCCG ACCCTGCTTT TCTGCCGGAA GAAGTCGCCT
GACATCCACG CGACCAAAGG GGAAACCGGC CTGAGGATGG TGCTGGTCCA TGGCATCGCC
GTGCGCGGAC TGCCCGCGCT CATTCACTCG CTCGGTGGTG ATGTCAGCGC GGAAGGCTGC
ACCCCCTGA
 
Protein sequence
METEDRSGGK KARVGFGKSA GAALGTLFFG PLLLAGCATT PDLQSAEHLV QDNFHGKARV 
VKVFPGPTQK LTGIIAENSQ HQQGILWMLS NRYLLLGPVV NDKGQDITRA ATEKYLPQPR
KVPAGQIAPA AMKAPGFTIG HAGPLMVVFA DPNCIYCHLL WEALQKPVAD GQLRVKLIPV
GFLKDSSAAK AATILAAPDP AAAWAENEKG FDKSTEEGGT RPLAQIPAED MKAVHANTAL
LQSSGEEATP TLLFCRKKSP DIHATKGETG LRMVLVHGIA VRGLPALIHS LGGDVSAEGC
TP