Gene Lferr_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2553 
Symbol 
ID6878552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2527969 
End bp2528547 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID642790410 
Producthypothetical protein 
Protein accessionYP_002220954 
Protein GI198284633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.59785e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.790729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG AGATTCAAGA GTGGCCAAGA AGTACCCGAT GGATACACGC GGGATTTGCG 
TTGGCGGTAA CGCTTCTGCT GTTCAGCGAA CTTGACATGA AGGCCATATG GAAAAAGGTC
GGAGAACTTC CATTCCGGCA TTTACTGTTT CACATGCATA TGTGGATTGG CATGTTTGCG
GCGGTTATTG TTATCGCATT CTGGGTACAG GTTTTCTCTA ATAAAAACCT TCGCTCGCAC
CTGTTCCCCT ACAGCGGAAC ATACCTGGAC AACGTCTGCA CCGATATCAG GGGGCTGGCA
AACGGAAAAC TGCCGCCGAG CGGGATGCGC GGTGGGGTGC CGGGCATGGT ACATGGTTTT
GGCTTGACTG CCGTGACCGG CATGGCCCTC CTGGGGTTTA TCATGTTTTT CCTGATTCCA
AATTATGGAG TGGCTGCGCC CATAGGCTTC TATCAGCTTC CCAAGAAGAT GCACGACTTT
CTTTCTTCAT TTGTCTGGTT GTACTGGTGG GGTCATATTG GCATGGCTAC ACTTCACGCA
AGCAAATCTC CGGCCATTTT GCGCGTATTC AGGCCGTAG
 
Protein sequence
MPEEIQEWPR STRWIHAGFA LAVTLLLFSE LDMKAIWKKV GELPFRHLLF HMHMWIGMFA 
AVIVIAFWVQ VFSNKNLRSH LFPYSGTYLD NVCTDIRGLA NGKLPPSGMR GGVPGMVHGF
GLTAVTGMAL LGFIMFFLIP NYGVAAPIGF YQLPKKMHDF LSSFVWLYWW GHIGMATLHA
SKSPAILRVF RP