| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2547 |
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| Symbol | |
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| ID | 6878546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2516056 |
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| End bp | 2519652 |
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| Gene Length | 3597 bp |
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| Protein Length | 1198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642790404 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_002220948 |
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| Protein GI | 198284627 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.789149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TCCTCGACCC CCTGCACCTG CCCCTGCACG GCAGCCGCCT CATCGAGGCC
AGCGCCGGCA CCGGCAAAAC CTGGACCATC GCCGCCCTCT ATCTGCGCAT GATCCTTGGA
CACGGCAGCG AAGGTGAACA TTTTCCCCGC CCCCTCCTGC CCGAAGATAT TCTGGTGATG
ACCTTCACCC GCGCCGCCAC CCAGGAACTC AAGGAGCGTA TCCGCGATCG CCTGCAAACG
GCTGCCCGAT ATTTCCGCGG CACCGAACAC CCAGCGCAGC CGGATCCCTT TCTCGAAGCG
CTGCTGGCCG ACCATCCCGA CCCCGAGGTC CGCGCCCGCG CCGCACACCA GCTTACCTTG
GCGGCCGATG CCATGGATGA CAGCGCCATT TTTACCATCG ACGCCTGGTG CCAGCGCACC
CTGCGCGAGC ACGCCTTCGC CACTGGCAGC GATTTCCGCG AAACCCTGCT CCTGGATGAG
ACCGACCTGC GCGACGATGC CGTACGCGAC TTCTGGCGGC AGGAAATCTA CCCGCTGGGC
GAACCCGCCC TCGATGAGGT CCTCCAGCTC TTTTCCGGCC CCGATAAGAT CCGGCAGGAG
ACAGCAGCCC TGTGCAAACT CGATCCGCCC CTGCCCGCCC CCGCATCGAG GCTGGCGGAC
TGGCTGCCCG ATGCCCTCGC CGCGCCCCGA CGGCGACTCG CCACCCTCAA GGCGCAATGG
GCGGCGGAGC ATGATGCCTT TGCGGAGTGG CTGTCAGGGC TCGTAAACGG TCCCAAGGCA
GACAATCCAT TGAATGGTAA TACCCTAAGC GCAGCTATTG TCAGTCGGGC CCTCGCCGCA
TTGCGTGATT GGGCCGACCG TTCCGATCCA TTGATTCCCG ACGAACTGGA TAAATGCCAG
CGCCTTTCTG CCAGCAAACT GCCCGAGTAT TGCAAAAACA AACCGCCTCC CGTCCTCCAC
CCCGCTGCCG AGACACTGGA TACCCTGTTC AGGGAGTTGG AGACCATCGC TCAACAGTTC
ACCCGACTGC ACGGTGAAAT TCGCACCCAC GCCGCCGCCT GGATCAACGC CCGGCTGAGT
CGGCTCAAGG CCCAGAGCGG ACAGGTCAGC TTTGCCGACT ATCAGCGGCG CCTCGCCAGG
GTACTGCACG ACAAAACCCA GGGACCGGCA CTCGCCGCCC GCCTGCGGCA GAAATATCCC
GCCGCCCTCA TCGACGAGTT TCAGGATACC TCCGCCCTGC AATATCAGAT CTTCGACGAC
ATCTACCACG CCGCCGACAA CAACCCCGAC ACTTTGCTTC TGCTCATCGG TGACCCCAAA
CAGTCCATCT ACGCCTTTCG CGGCGCGGAC ATCGACAGTT ATCTGCAGGC ACGTCGCCTG
ACCGAGGGCC GCCATTACGC CCTCGGCACC AATTATCGCT CCAGCCACGC GCTGGTCAGC
GCCCTCAACG CCATCTACAC CGCCGCCGAA CACGACGACC CGCAAGGCGC TTTTGCCTAT
GCCGCCCCCG GTGCCGACAA CCCGCTCCCT TACCAGCCGG TGCAGGCCCA TGGCCACCAG
AAAGTCTGGC GGATCCATGG CAAAGCCGCC CCCGCCCTGA CGTTCTGGGG TGCCGGCGAG
AAGCTGAACA AAGGCGACTA TCTGGAACGC TGCGCAGCAC AGGCCGCAGA ATGTATTGTC
GGACTGCTCG ACAATCCGGA AGCAGGATTC GCGCAGGAGG GAGAAATCAC CCGACGGCTG
GAGGCCAAGG ACATCGCCAT TCTCGTCCGC GATCGTCATG AAGCCGCCAG CATCCGTCAG
GCCCTCCACC ACCGCCAGTT ACGCAGCGTC TTTCTCTCGG AGCAGGATTC CGTCTATGCC
AGTGAGGAAG CCCGCGAACT GCTTCTCTGG CTGGAGGCGG TGGCCGAACC CGAAGATGCC
CGCCGTCTGC GCGTCGCCCT CGCCCTGCCG CTGCTGGGAC AACCCCTCAG CGCCCTGGAT
GCCTTTCATC AGAACGAAAC GGCCTGGGAG GCGCAACTGG AGCAGTTTCA GGATCTGTCC
CGGCAATGGC GGCGGCAGGG CGTGCTGGCC ATGCTCCACC ACAGCATCCA TCAGTTCGGC
ATTGCCGCCC GCCTGCTGAC GCAGCCCGAG GGCGAACGTC GCCTCACCAA CCTGCTCCAT
CTCGGCGAAC TCTTGCAGCA GGCGAGCGCC ACCATCGACG GCCCCGAGGC CCTCGTTCGC
CACCTGCATC AGGCCATCGC CGCCGGAAGT GATCAGAGCG ATGCCCACAT CCTGCGTCTG
GAGAGCGATG CCGGACTGCT GCGCGTGGTC ACCATCCACG CCGCCAAAGG TCTGCAATAT
CCCCTGGTTT TTTTGCCCTT CATCGCCACC TGCAAGGCCG CCAGGGCCAA CCCCTTTACG
GTCATCCACA GCGCGGAAGG ACAGCCCGCC ATCCACTGGG AAAGTGGCGA CACGACGGCG
GCGGAAAGGG CACGGTTGCA GGAAGATCTC CGCCTCCTCT ACGTCGCCCT CACCCGTGCC
GAGCACGCCC TCTGGCTGGG CCTCGCCGCA CCGAAGACGG CGGGAACACC GATCTTTGCC
GGCAGTGCCA TCGCCCATCT GCTGGGTAGC GAACGCACCG CCCGCGATCT CGCCACCTTG
CTCGAAGACT GCGCCCGCCT CTCTCCGGAG ATTGTCGTCG AGACGCTACC GGACAGCATC
CCCACGACGC TGTTCGTGCG GCCCCGCAAC AACGCCCACA ACCCGCCCCC AGAGTACACC
GCCAGCTTCG AGAAGCACTG GGGCGTTGCC AGCTTCTCCC ATCTGGTGCG CGAACTCCCT
GCCGATCCGG CGGCGCCACC GACGCCCCGG CGCGCCCAGG CCGGCGCCCC CTGGCATCGC
TACCCGCAAG GCATGAACGC CGGCACCTTT CTCCACGACC AACTGCAACG CCTCGCCCAG
AATGGCTTTG CCCAAATCGG TCAGGACCAA TTTGTCGAAC AACTGCACAA GGCCTGTACC
CAGGCCGGCC TGGGCGACTG GGTCGGGGAG ACCGCCGAAT GGCTGCAAGC CATCGTCCAT
AGCCCCCTTG CCCCCCTCAC GGCGGCGCTC TGCGATCTCA GCGACACCCT GAGCGAAATG
GCCTTCTGGT TTCCCAGCGA CGCCTTGCGC AGCGACGACC TGGACAGGCT CTGCCAACAG
CATATTTTCC CCGGTGCCGA TCGCCCCAGG CTCCCCCAGC GGGTCATTCA CGGCATGATG
CGCGGCTTCA TGGACCTCGT CTTCGAGCAA GGAGGGCGTT ACTACGTCCT CGATTACAAA
TCCAACGTCC TCGGCAGCGA GGATGCCGAT TACCACGCCA AAGCGCTGCG CGACGCCACC
CTCGGTCATC GCTACGAACT GCAATCCAGC CTCTACCAAC TGGCCCTGCA CCGCCTGCTG
CGCCAGCGCA TGGGCAGCCG CTACCGGCCC GAGACCCATC TCGGCGGCAC CCTCTTCTTC
TTCCTGCGCG GGCTGCAAGG ACCGGAGCGA GGCGTGCTCC ATCTTCCCGC CGACCTCGCC
CTGCTCGATG CCCTCGACGG CCTCTTCGGC TGGCCGCAGC GGGCAACCCA GCCATGA
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| Protein sequence | MTTILDPLHL PLHGSRLIEA SAGTGKTWTI AALYLRMILG HGSEGEHFPR PLLPEDILVM
TFTRAATQEL KERIRDRLQT AARYFRGTEH PAQPDPFLEA LLADHPDPEV RARAAHQLTL
AADAMDDSAI FTIDAWCQRT LREHAFATGS DFRETLLLDE TDLRDDAVRD FWRQEIYPLG
EPALDEVLQL FSGPDKIRQE TAALCKLDPP LPAPASRLAD WLPDALAAPR RRLATLKAQW
AAEHDAFAEW LSGLVNGPKA DNPLNGNTLS AAIVSRALAA LRDWADRSDP LIPDELDKCQ
RLSASKLPEY CKNKPPPVLH PAAETLDTLF RELETIAQQF TRLHGEIRTH AAAWINARLS
RLKAQSGQVS FADYQRRLAR VLHDKTQGPA LAARLRQKYP AALIDEFQDT SALQYQIFDD
IYHAADNNPD TLLLLIGDPK QSIYAFRGAD IDSYLQARRL TEGRHYALGT NYRSSHALVS
ALNAIYTAAE HDDPQGAFAY AAPGADNPLP YQPVQAHGHQ KVWRIHGKAA PALTFWGAGE
KLNKGDYLER CAAQAAECIV GLLDNPEAGF AQEGEITRRL EAKDIAILVR DRHEAASIRQ
ALHHRQLRSV FLSEQDSVYA SEEARELLLW LEAVAEPEDA RRLRVALALP LLGQPLSALD
AFHQNETAWE AQLEQFQDLS RQWRRQGVLA MLHHSIHQFG IAARLLTQPE GERRLTNLLH
LGELLQQASA TIDGPEALVR HLHQAIAAGS DQSDAHILRL ESDAGLLRVV TIHAAKGLQY
PLVFLPFIAT CKAARANPFT VIHSAEGQPA IHWESGDTTA AERARLQEDL RLLYVALTRA
EHALWLGLAA PKTAGTPIFA GSAIAHLLGS ERTARDLATL LEDCARLSPE IVVETLPDSI
PTTLFVRPRN NAHNPPPEYT ASFEKHWGVA SFSHLVRELP ADPAAPPTPR RAQAGAPWHR
YPQGMNAGTF LHDQLQRLAQ NGFAQIGQDQ FVEQLHKACT QAGLGDWVGE TAEWLQAIVH
SPLAPLTAAL CDLSDTLSEM AFWFPSDALR SDDLDRLCQQ HIFPGADRPR LPQRVIHGMM
RGFMDLVFEQ GGRYYVLDYK SNVLGSEDAD YHAKALRDAT LGHRYELQSS LYQLALHRLL
RQRMGSRYRP ETHLGGTLFF FLRGLQGPER GVLHLPADLA LLDALDGLFG WPQRATQP
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