Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2517 |
Symbol | |
ID | 6878516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2476924 |
End bp | 2477892 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790374 |
Product | Polyprenyl synthetase |
Protein accession | YP_002220918 |
Protein GI | 198284597 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGG AGGAAGTCAA CCGCCTCGTA CGGGCCGATA TGGCGGCGGT GAACAGCGTT ATCCAGGAAC AATTGCGTTC GGGGGTGCCG ACCATTCCGG CCATGGGGAC TTACCTGATC AATGCCGGCG GCAAAAGGCT GCGGCCCATT GTTCTGCTGC TCGCCGCACG CATGGGTGGT GAGCGTGGTC CGCGTCCGAT CTCTCTGGCG GCTGTTGTCG AGTTTATCCA TACGGCGACG CTGCTGCATG ATGACGTAGT CGATGGTTCC GAACTGCGGC GCAGCAATGC GACTGCCAAT CAACGCTGGG GCAACGCCGC CGCCGTACTC GTCGGGGATT TTCTTTACGC CCGATCCTTC GAGATGATGG TACAGGACGG TGATATGCGT ATCCTCGCCA CCATGGCGGA GGCCACCAGC GTTATTGCCC AGGGAGAGGT TGCGCAACTG GAGAATGCCA ACGATCCCGA TCTGAGTCCT GAGGCGTACT TCGCGGTCAT AGAAGCCAAG ACCGCCAAGC TCTTCGAGGC CGCCGCCCGT ATCGGGGCGC TGGTAAACGA ACTGGATGCC GCTGCGGAGA AGGCCTTGGC GCAATACGGC TCGCTGCTCG GCATCGCCTT TCAGTTGATG GATGATGCCT TGGATTACTC CACCAGCGCC GAGAAAATGG GCAAAAACCG GGGCGACGAT CTGGCGGAAG GCAAGGCAAC CCTGCCCTAT ATCCACGCCA TGCAGCATGC CACGGCGGCG GAGCAGGCCA TTTTGCGTGA AGCACTGAGC GGCAATGCGC CAGCCGTCTT TGGAACGGTC TGGGAAATCA TTGCCAGAAC AGGGTCAATT GATTACACTT TGCGCGTCGC GAAGGAAAAG GCGGATCAGG CCATTGCTTG TCTGTCCGGG TTTCCGGCAG GTATGGAGAA GGAAGCTCTG GCTTTTTTGG CGGCATTTGC CGTGCGGCGT GATTTTTGA
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Protein sequence | MNLEEVNRLV RADMAAVNSV IQEQLRSGVP TIPAMGTYLI NAGGKRLRPI VLLLAARMGG ERGPRPISLA AVVEFIHTAT LLHDDVVDGS ELRRSNATAN QRWGNAAAVL VGDFLYARSF EMMVQDGDMR ILATMAEATS VIAQGEVAQL ENANDPDLSP EAYFAVIEAK TAKLFEAAAR IGALVNELDA AAEKALAQYG SLLGIAFQLM DDALDYSTSA EKMGKNRGDD LAEGKATLPY IHAMQHATAA EQAILREALS GNAPAVFGTV WEIIARTGSI DYTLRVAKEK ADQAIACLSG FPAGMEKEAL AFLAAFAVRR DF
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