| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2482 |
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| Symbol | |
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| ID | 6878480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2446864 |
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| End bp | 2447901 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790339 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002220884 |
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| Protein GI | 198284563 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTT CCCCCAAAAA ACGTGCTCTG GCACTGGTAG TAGTGCTTAT CGTTGCTGGT
GCGGTCGCCT ATTATTTTCT GAGCCGCCAT CACGCCCCAG AAAAAACCGT CACCATCTAC
GGCAATATCG ACATCCGCCA GGTACAGGCG GCCTTTGACG ACAACGGCCG GCTTCTCGAT
CTCCGGGTAC AGGAGGGCGA CCGGGTAAAA AAGGGACAAT TGCTGGCGGA TCTGGACCCC
GTACGGTTTC AGGACGCCGT AGATAAAGAT GCCGCAGGTA TGGCCGCGCA AGAGCAGGTG
CTGGCGCGCC TGCTGGCGGG TTCCCGTCCG GAAGAAATCG CCGAGGCCCG GGCCGAAGCC
GCTGCCGCTC AGGCGACCCT GAGCAATGCC GAGATCACCT GGCAACGCCA GCAGGCCCTT
GCCGCACGGC AATATGTGCC CAAACAGAGT CTCGACAACG CCGCCGCCGC CCTGAAAACG
GCTCGCGCCA ATCTGGACCG CGCCCAGCAG GCACTGACCC TGGCCATCAA GGGGCCGCGC
AAAGAAGATA TTGCGGCGGC GCGGCAGCAG TTACAAGCCG ATAAGGCAGG TCTGTCTCTG
GCGCGCCGCG AACTCACGGA CACCCGTCTT TATGCGCCAG AAGACGGTGT CGTTCAGGAC
CGTATTCTGG AGCCGGGCGA CATGGTTTCC CCGCAGACTC CAGTATTCAC TTTGGCATTG
GACAATCCGG TCTGGGTGCG CGCCTATCTG CCGGAAAAGG CATTGGGGCA GGTGCGGCTG
GGCATGAAGG CGACGATTAG CAGTGATTCC TTCCCGGGCA AATCTTTCCC GGGCTGGGTG
GGTTTCATTT CACCCACTGC GGAATTCACG CCCAAGACCG TGCAAACCAC GGAGTTGCGT
ACGGAACTGG TGTACCGGGT GCGGGTCTAT GCCTGCAATC CGCAGCATCG CCTGCGCCTG
GGTATGCCCG TCACCGTTCA TATTCCGCTG ACAGACAATC AGCCGCAAAA GCTTTCTGCG
CATCCCTGCG GAAACTGA
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| Protein sequence | MAISPKKRAL ALVVVLIVAG AVAYYFLSRH HAPEKTVTIY GNIDIRQVQA AFDDNGRLLD
LRVQEGDRVK KGQLLADLDP VRFQDAVDKD AAGMAAQEQV LARLLAGSRP EEIAEARAEA
AAAQATLSNA EITWQRQQAL AARQYVPKQS LDNAAAALKT ARANLDRAQQ ALTLAIKGPR
KEDIAAARQQ LQADKAGLSL ARRELTDTRL YAPEDGVVQD RILEPGDMVS PQTPVFTLAL
DNPVWVRAYL PEKALGQVRL GMKATISSDS FPGKSFPGWV GFISPTAEFT PKTVQTTELR
TELVYRVRVY ACNPQHRLRL GMPVTVHIPL TDNQPQKLSA HPCGN
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