| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2467 |
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| Symbol | |
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| ID | 6878465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2431919 |
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| End bp | 2434723 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642790324 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_002220869 |
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| Protein GI | 198284548 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA TCCACATCCG GGGCGCCCGC ACCCACAACC TCAAGAATAT TTCCCTTACC
TTACCGCGCG ACCGCCTCAT CGTCATCACC GGGCTGTCCG GATCGGGCAA GTCGTCGCTG
GCCTTCGACA CCCTCTACGC CGAGGGTCAG CGCCGCTATG TGGAAAGCCT CTCGGCCTAT
GCCCGCCAGT TTCTCTCCCT CATGGGCAAG CCCGATGTGG ATGCGATCGA GGGGCTCTCC
CCCGCCATCG CCATAGAGCA GAAATCCACC TCCCATAATC CTCGCTCCAC CGTCGGCACC
GTCACCGAGA TTCACGACTA TCTGCGCCTG CTCTATGCCC GTGCCGGTAC CCCCTGGTGC
TGTGGCGCGC CCATTCAGAG CCAGACCATC AGCCAGATGG TCGATCAGCT CCTGGCCCTG
CCCGAGGGCG AAAAGCTCAT GATCCTGGCG CCGGTGCTGC GTGACCGCAA AGGCAGCCAC
GAGGACGTCA TCGGCAGCCT GCGCGCACGC GGTCTGATTC GCGCCAGGGT GGATGGTCAA
CTCCTCGAAC TGGACGAAAT CCCCGCCCTG GACAAGAAGC GCAAGCATCG CATCGAGGCC
GTCATCGACC GTCTGGTGCT GCGCGGCGAC AGCGGGCCGC GCCTGGCCGA ATCGCTGGAA
ACCGCCCTCA GCCTCGCCGA GGATCAGGCC ATCGTCGTCC TCATGGGGCC ACAGCATGAG
GAAGAGCGAC TGTTTTCAGC TCACCATGCG TGCCCCAGCT GCGGGCGTTC CTTCCCGCCT
TTGGAGCCGC GCCTCTTCTC TTTCAATAAT CCCGCCGGGG CCTGCCCACG CTGTGACGGC
CTCGGCGAGA TCACCTTTTT TGACCCCGAC CTCATCGTCC CCGATCCGGA ACTGAGCCTG
CGTGACGGGG CTATCGCCGC CTGGACCAAG CGCCATCAGG AGCACTACGC GCCCCTGCTC
ACGGCGCTGG CCGAGCACCT TCATTTTTCC CTGGATACCG CCTGGCAGGA TCTACCCTTC
GACATCCGCG AGCATATCCT CCATGGGAGT GCCGAACGCA TCACCGTCCA GCAAGGGACG
CACCGTCACA AGCTGAGCTT CGAGGGCGTC ATTGCCGGGC TGGAACGCCG CCTGCGCGAA
ACCCAGTCCA ACCTCATCCG CGAAGAAATC ATGCGCTATA TGGGCCGTCT GCGTTGCCCC
GTCTGTAATG GCAGCCGCCT ACGCGAAGAG GCGCGCATGG TCAGGGTTGG CCCGCTGGCC
ATTCAGGAGG TCTCTGCCCT CTCCATCCGT GACGCCTTGC AACACTTCAC CCACCTGCAG
CTGGAAGGGC AGGAAGCCCT CATCGCCGAG CGCATCCTCA AGGAAATCGG CAGCCGTCTG
ACGTTTCTGG TGGATGTCGG CCTCGACTAC CTCAGCCTCG ACCGCTCCGC AGAAACCCTC
TCCGGTGGGG AAGCGCAGCG CATCCGTCTC GCCTCGCAGA TCGGAGCCGG GCTGGTGGGC
GTGATGTACG TCCTCGACGA ACCCTCCATT GGCCTGCACC AGCGCGACAA TGATCGACTC
ATCGGCACCC TCAAGCATCT GCGCGATCTC GGCAACACCG TCATCGTCGT CGAGCACGAT
GAAGACGCCA TCCGCGCCGC CGATTATGTG GTGGACATGG GCCCCGGCGC CGGCACCCAC
GGCGGCGAAG TCATCGCCCA AGGTACACTG GAAGATATCT GCACCAATCC CAACTCCCTC
ACCGGGCGCT ATCTGACCGG CGATCTGTGC ATCGCCGTCC CCGGACGGCG CCGCGCCAAT
GTCAGCCAGC GCTGGCTGGA AGTGCAGGGC GCCACCGGCA ACAATCTCAA GTCGGTGGAC
GTGCGCATTC CCATCGGCCT CTTCACCTGT ATCACCGGGG TCAGCGGTTC CGGTAAATCG
ACCCTCATCA ACGACACCCT CTACCCCGCC TGCGCCCGCG TGCTCATGGG CAGCAGCCAG
AATCCTGCGC CCCACAGGCA GATACGCGGC CTGGAAGAAC TGGACAAAGT CATCGCCATC
GACCAGAGCC CCATCGGCCG CACCCCGCGC AGCAACCCGG CCACCTACAC CGGCCTCTTC
ACCCCGATCC GCGAATTGTT CGCCGCGACC AGCGAAGCCC GTACCCGCGG CTACAATCCC
GGCCGCTTCA GCTTCAACGT CAAGGGCGGG CGCTGTGAAG CCTGCGAGGG CGACGGCGTC
ATTCGGGTGG AAATGCACTT TCTGCCGGAT ATTTATGTGC CCTGCGACGT CTGCGGCGGC
AAGCGCTACA AGCGCGAGAC CCTGGATGTG CATTACAAGG GCAAAAGCAT TCACGACGTC
CTGGAGATGA CCGTGGAGGA TGCGCGGGCC TTTTTTGACC CTGTCCCCGC CATCGCCCGC
AAATTGCAGA CCCTGCTGGA TGTGGGCCTC GGTTACCTGC GTCTGGGCCA GTCGGCCACT
ACCCTCTCCG GCGGCGAAGC ACAGCGCGTC AAGCTCTCCC GGGAACTCTC CCGTCGCGAC
ACCGGACGGA CCCTCTACAT CCTTGACGAA CCCACCACCG GCCTGCACTT TCATGACATC
GCCCTGCTCC TGGAGGTACT GCAGAAGCTG GCCGATGCGG GCAATACCAT CGTCGTTATC
GAACATAATC TGGACGTCAT CAAGACGGCA GACTGGGTCA TCGACCTCGG CCCCGAAGGC
GGCTCGGGCG GCGGCCAGAT CATCGCCACC GGCACACCGG ATGAAGTGGC ACACAATCCG
TCTTCCCACA CCGGGCGTTA TCTGGTGCGG CATCTCCATC GTTGA
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| Protein sequence | MEHIHIRGAR THNLKNISLT LPRDRLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMGK PDVDAIEGLS PAIAIEQKST SHNPRSTVGT VTEIHDYLRL LYARAGTPWC
CGAPIQSQTI SQMVDQLLAL PEGEKLMILA PVLRDRKGSH EDVIGSLRAR GLIRARVDGQ
LLELDEIPAL DKKRKHRIEA VIDRLVLRGD SGPRLAESLE TALSLAEDQA IVVLMGPQHE
EERLFSAHHA CPSCGRSFPP LEPRLFSFNN PAGACPRCDG LGEITFFDPD LIVPDPELSL
RDGAIAAWTK RHQEHYAPLL TALAEHLHFS LDTAWQDLPF DIREHILHGS AERITVQQGT
HRHKLSFEGV IAGLERRLRE TQSNLIREEI MRYMGRLRCP VCNGSRLREE ARMVRVGPLA
IQEVSALSIR DALQHFTHLQ LEGQEALIAE RILKEIGSRL TFLVDVGLDY LSLDRSAETL
SGGEAQRIRL ASQIGAGLVG VMYVLDEPSI GLHQRDNDRL IGTLKHLRDL GNTVIVVEHD
EDAIRAADYV VDMGPGAGTH GGEVIAQGTL EDICTNPNSL TGRYLTGDLC IAVPGRRRAN
VSQRWLEVQG ATGNNLKSVD VRIPIGLFTC ITGVSGSGKS TLINDTLYPA CARVLMGSSQ
NPAPHRQIRG LEELDKVIAI DQSPIGRTPR SNPATYTGLF TPIRELFAAT SEARTRGYNP
GRFSFNVKGG RCEACEGDGV IRVEMHFLPD IYVPCDVCGG KRYKRETLDV HYKGKSIHDV
LEMTVEDARA FFDPVPAIAR KLQTLLDVGL GYLRLGQSAT TLSGGEAQRV KLSRELSRRD
TGRTLYILDE PTTGLHFHDI ALLLEVLQKL ADAGNTIVVI EHNLDVIKTA DWVIDLGPEG
GSGGGQIIAT GTPDEVAHNP SSHTGRYLVR HLHR
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