| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2460 |
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| Symbol | |
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| ID | 6878458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2424089 |
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| End bp | 2425795 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790317 |
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| Product | glycoside hydrolase family 57 |
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| Protein accession | YP_002220862 |
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| Protein GI | 198284541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGG CGCGTGCGCT TCATGTCATT TTCTGCTGGC ACATGCACCA GCCTGATTAC
CGCGATGCCG ACGGCTTCTA CACCCTGCCG TGGACCTACC TGCATGCCTG CAAGGACTAC
GCGGATATGG TGGCACATTA TGAGGAGAAC CCCCTCGCCC GGGGAGTGTT CAACTTCGTG
CCGATATTGA TCGAGCAGTT GGAGGACTAT ACCGAGCAAT TCCGGAGCGG GCAGTTTCGC
GATCCGCTGC TGATTGCACT GGCCACGGGA GACCTCAAGA CACTGCCCAA CGAACAGCGG
CATTTCCTTC TGGAGCAATG TTTTCGCCTC GACCACGAGC ACATGCTCAC CCCCTTCCCG
CCCTATCGTC GCCTGTATGA GATTTACCAG CTCATATTGG AGGACGTTAA GGAGATGGCG
GATTATCTCT CGGTACAATA CATCGCGGAC CTTCTGGTCT GGTACCACCT GGCCTGGACC
GGGGAAACCG TGCGCCGCGG CAGTCCCTTT CTCCAGTCAC TGTTCGCCAA AGGCCATGCT
TTCAGCCAGG AAGACCGCCG GCAACTGGTG GCGTTTCTCG GCGAACTCAT CGCCGGCCTG
ATTCCCCGCT ATCGCGCCTT GGCGGAAGCG GGACGTATCG AAATTTCCAC CACCCCCTAC
TACCACCCCA TCGGCCCCCT GCTGCTCGAC TTTGCGGTAG CGCACGAGGC GGTGGCGGAC
GCGCCGTTGC CGGACTGTCC GGTCTACCCC GGCGGCACCG AGCGTGCCCG CTGGCACATC
GACCGGGCGC AGAATAGCCA TCCCCGGCAT TTCGGGGTAC CGGCGCAGGG CATGTGGCCA
GCGGAAGGAG GGGTCTCTGC CGCCTTTGTC GAAATGATGG GCAGCGCCGG CGTGCGCTGG
ACGGCCTCCG GTGAAGGCAT ATTGACCCAC AGCCTGCTGC TCGGCAACGA CGACAACGGT
CCCCGCGGCC GGGCGGAATA CCTGTACCGC CCCTACCGAC TGCAGGGGCA GGGTCCTGTG
ATCTTCTTCC GCGACGATGC CCTCTCCGAC ATCATTGGCT TCGATTACAA AACCTGGTTC
GGCCACGATG CAGTCACGGA CTTCATCCAC AAACTGGAGG CGATCTGGCG GCAGACGGAA
CATGAGGAAA ACCCCGTTGT CAGCATCATT CTGGATGGCG AGAACGCCTG GGAATACTAT
CCCTACAATG GCTACTACTT TCTCTCCGAG CTTTATAAAT CCCTGGCCAA TCACCCCCAC
ATCCAGATGT GCACCTTCAG CGACTTCGTC AACCACCATG CCGATGGTAT CCAGAGCATA
CCCCATCTGG TCGCTGGGAG CTGGGTCTAC GGCAGCTTCA GCACCTGGAT CGGCGAGGCT
GCCAAAAACC GCGCATGGGA CCTGCTCTGC GCCGCCAAAC AGGAGGTGGA TCAGCATATC
GGGCAATTTC CTGCGGAGCA GCAGGCGCGC ATCCTCGAAC AGCTTGGCCG CTGTGAGGGC
TCCGACTGGT TCTGGTGGCT GGGTGATTAC AATCCCTCGG ACTCGGTCCG CGATTTCGAT
CATCTATACC GCCTCAACCT CCGCAAGCTC TACACCCTGA TGCAAATCCC CGCCCCCGAC
AACCTCAGCG AGTTCATCAG CCACGGCGGC GGCGCGGCGG AGGCCGGTGG TACCATGCGC
CGTACCCACA CCAAGGACCC TGAATGA
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| Protein sequence | MPPARALHVI FCWHMHQPDY RDADGFYTLP WTYLHACKDY ADMVAHYEEN PLARGVFNFV
PILIEQLEDY TEQFRSGQFR DPLLIALATG DLKTLPNEQR HFLLEQCFRL DHEHMLTPFP
PYRRLYEIYQ LILEDVKEMA DYLSVQYIAD LLVWYHLAWT GETVRRGSPF LQSLFAKGHA
FSQEDRRQLV AFLGELIAGL IPRYRALAEA GRIEISTTPY YHPIGPLLLD FAVAHEAVAD
APLPDCPVYP GGTERARWHI DRAQNSHPRH FGVPAQGMWP AEGGVSAAFV EMMGSAGVRW
TASGEGILTH SLLLGNDDNG PRGRAEYLYR PYRLQGQGPV IFFRDDALSD IIGFDYKTWF
GHDAVTDFIH KLEAIWRQTE HEENPVVSII LDGENAWEYY PYNGYYFLSE LYKSLANHPH
IQMCTFSDFV NHHADGIQSI PHLVAGSWVY GSFSTWIGEA AKNRAWDLLC AAKQEVDQHI
GQFPAEQQAR ILEQLGRCEG SDWFWWLGDY NPSDSVRDFD HLYRLNLRKL YTLMQIPAPD
NLSEFISHGG GAAEAGGTMR RTHTKDPE
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