| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2458 |
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| Symbol | |
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| ID | 6878456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2420335 |
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| End bp | 2422542 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790315 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_002220860 |
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| Protein GI | 198284539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCAA TGCAAAAGCG TGGCAGTACG GGGGGCGGTC CGTCCGGCGA CAGTGAAGAC
GGTTTGGCCA TTCGTGAGGC TCGTCATCAC GACCCCTTCG CCTGGCTGGG CCAGCATACG
GTTGATGGGC GGAGCGTGCA GCGGGCCTTT CTGCCCGGAG CCTTCGGCGT GGAGATACAG
ACGCCAGCGG GATGGGTGGT CATGGAACAG AGCCATCCGG CCGGCATTTT CACCCATCAG
GGCGAGGTCA TACCGGTGCC TTACCGCCTG CGCTGGGAGG ATCGGCACGG ATTCCACGAA
CGCCATGACC CTTATGTCTT CGGCCCGGTG TTGGGGGATG TGGAGGTGTA CCTCTTCGGC
GAGGGGCGCC TCTATGAAGC CTATCGTCAC CTCGGTGCGC ACCGTCGCCA TCACGAGGGA
GTGGATGGGG TGTTATTCGC CGTATGGGCG CCCAATGCGG GACGGGTCAG TGTCGTCGGT
GATTTCAATG ATTGGGACGG CCGCGCCCAC CCCATGCGCG CGCGTGGCCA GAGCGGCATC
TGGGAACTGT TCATCCCGGA CCTCGCCACT GGCGAAATCT ACAAATTCGA GATCCGTCAC
CGCGATTCCG GGGCGGTATT CGTCAAGACC GACCCCTACG CCCATGCCTT TGAGCTCAGA
CCGAGTACGG CGGCACGCGT GGTGGAAAAT GACCACGTCT GGGAGGATCA GGACTGGATG
GCGGCTCGGA CCGGTCAGGA CTGGCAGCAC GCCCCCATGA ACATCTACGA AGTGCATCTC
GGTTCGTGGC AGCGTGATGC GGCGGGCCAT TTCCTCAGTT ACGCGGCGCT GGCGGAAAGT
CTGGTGTCCT ACTGCAAGGA TATGGGTTAT ACCCACATCG AACTGATGCC GGTGATGGAG
CACCCTCTGG ACGAATCCTG GGGCTATCAG GTGAGCGGCT ATTTTGCACC CACCAGCCGC
TTCGGTACGC CCGACGGCTT CCGCGCCTTT GTGGATCAGT TTCATCAGGC GGGCATCGGT
GTGCTTCTGG ACTGGGTGCC GGGGCATTTC CCCCGGGATG ACTGGGGGCT GGCGCGCTTC
GATGGCACCC CGTTGTATGA ACATGCCGAT CCGCGCGAGG GCGAGCACAG CGACTGGGGC
ACTTATATTT TCAACTTCGG ACGCAACGAG GTGCGTGGTT TTCTGCTGGC CAATGCCTGC
TACTGGGCGG ACAGTTTCCA TATCGACGGG TTGCGCGTGG ATGCGGTGGC GTCCCTGCTC
TACCGCGATT ATTCGCGTCA GGAGGGCGAG TGGATTCCCA ATCAGTACGG TGGCCGGGAA
AATCTCGAGG CCATTGATTT CCTGCGCGAG ATGAATGTGA TCCTCAATGA GCGTCATCCG
GGCATCCTCA CCATTGCCGA AGAGTCCACG TCCTGGCCGA TGGTCTCCCG CCCCACCTAT
GTGGGCGGCC TGGGTTTTTC CATGAAGTGG AATATGGGCT GGATGAACGA TACCCTGGCC
TACCTGGAAC AGGACCCGGT CTACCGGCGC TTTCACCAGA ACGACCTGAC CTTCAGCCAG
CTTTACGCTT ATTCGGAAAA CTTCGTGCTG CCCTTGTCCC ATGACGAAGT GGTGCATGGC
AAGCGTTCAT TGCTGGACAA AATGCCGGGG GATGCCTGGC AGCGTTTTGC CAACCTGCGC
CTGCTGTTCA GCTACCAGTT TGCGCATCCC GGCAAGAAAC TGAATTTTAT GGGCAACGAG
TTCGGCCAGG GACGGGAGTG GGATTGCGGG CAGGCCCTGG ACTGGGACCT GCTGCATTGG
GACTGGCATC AGGGCATTCA GCGGTTGAGC CGAGATCTGG CCCGTCTCTA CCGGGATATT
CCGGCCTTGT ATGCGCAGGA TTTTCAGGGC GAGGGCTTCT CCTGGGTGGA TTGCCATGAC
GCCGATCAGT CGGTGTTGAG TTTTCTGCGC TGGGACCGGG ACGGCGGTTT CGTGCTGGCG
GTGTTCAATT TTACGCCGGT GCCTCGGCGC AATTATCGTC TGGGGGTGCC GGCTGCGGGT
CGGTACCGGG AGATCTTCAA CAGCGACGCG GGCGCCTATC ACGGCAGCAA TGTGGGCAAT
CTGCCGCAGC AGGCCCAGGA TCAGTCGTGG ATGGGTCTGT CCCATTCGCT GGAACTGGTC
CTGCCGCCCC TGGGCGCGAT TTATCTACAG CTTACCGGAG TAGGCTGA
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| Protein sequence | MTAMQKRGST GGGPSGDSED GLAIREARHH DPFAWLGQHT VDGRSVQRAF LPGAFGVEIQ
TPAGWVVMEQ SHPAGIFTHQ GEVIPVPYRL RWEDRHGFHE RHDPYVFGPV LGDVEVYLFG
EGRLYEAYRH LGAHRRHHEG VDGVLFAVWA PNAGRVSVVG DFNDWDGRAH PMRARGQSGI
WELFIPDLAT GEIYKFEIRH RDSGAVFVKT DPYAHAFELR PSTAARVVEN DHVWEDQDWM
AARTGQDWQH APMNIYEVHL GSWQRDAAGH FLSYAALAES LVSYCKDMGY THIELMPVME
HPLDESWGYQ VSGYFAPTSR FGTPDGFRAF VDQFHQAGIG VLLDWVPGHF PRDDWGLARF
DGTPLYEHAD PREGEHSDWG TYIFNFGRNE VRGFLLANAC YWADSFHIDG LRVDAVASLL
YRDYSRQEGE WIPNQYGGRE NLEAIDFLRE MNVILNERHP GILTIAEEST SWPMVSRPTY
VGGLGFSMKW NMGWMNDTLA YLEQDPVYRR FHQNDLTFSQ LYAYSENFVL PLSHDEVVHG
KRSLLDKMPG DAWQRFANLR LLFSYQFAHP GKKLNFMGNE FGQGREWDCG QALDWDLLHW
DWHQGIQRLS RDLARLYRDI PALYAQDFQG EGFSWVDCHD ADQSVLSFLR WDRDGGFVLA
VFNFTPVPRR NYRLGVPAAG RYREIFNSDA GAYHGSNVGN LPQQAQDQSW MGLSHSLELV
LPPLGAIYLQ LTGVG
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