Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2383 |
Symbol | |
ID | 6878379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2354572 |
End bp | 2355228 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642790244 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_002220791 |
Protein GI | 198284470 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.571518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATTC TCCACGCCAT GCCACCCACC CGGCTTCGGT CCCGGAGCAC CGCTCGCACA CTGGCCGCAC TCCTGCTTAC CGGTGTGCTG TCCGCCTGTG CGACCACCCC TCCCGTTTCA CCATCCCCCA GGGTCATCCT GCCGACCGCC GAGAGAAACC AGGTCGTCGC CAGCCTGAAA CAGTGGCAGG CCAGCGGCCA GGCAGCACTC AGCACCCCCA AAAGCAGTGA AGACTTCGGA TTCGACTGGA AGCAGTCTCC CGGGCGCCAG GAGTTCTCCG TTTACGACCC CCTCGGCCGC ACGGTCGCCC GCATTACCGT TGATCCCCGA GGCGCGCACC TGCAACTGGC CAATGGAGAT ATCCGGCAGG CGGATACTCT GGAGGCGCTC CTTGCGCTGG TCCTCCATGT TGATCTGCCG GCGAATGAGT TGCCGGACTG GATGCTTGGC CTGCGCCGCG GTACGGCGAC TGAGCAGCAG AATGCCGCAG GCCTGCCCGA AGTCCTGCGC AGCGGCCCCT GGCGGATCCA ATATCTCCAA TATGCGCCGG TAGGCGGCCT CACCATGCCC AAGCTGCTCC AGGCCACGGG GCCGGAGGGC ATCACCCTAC GCCTGGCCAT CACCCAATGG CGTATGGGGG AACCTGGCAC TCCATGA
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Protein sequence | MRILHAMPPT RLRSRSTART LAALLLTGVL SACATTPPVS PSPRVILPTA ERNQVVASLK QWQASGQAAL STPKSSEDFG FDWKQSPGRQ EFSVYDPLGR TVARITVDPR GAHLQLANGD IRQADTLEAL LALVLHVDLP ANELPDWMLG LRRGTATEQQ NAAGLPEVLR SGPWRIQYLQ YAPVGGLTMP KLLQATGPEG ITLRLAITQW RMGEPGTP
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