| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2361 |
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| Symbol | |
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| ID | 6878356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2333275 |
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| End bp | 2335173 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642790221 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_002220769 |
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| Protein GI | 198284448 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000579697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000944183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTATACCG TTATAAGAAA GCCCGCTGCG GGGCTTGTGG TCCCGGCGTT TTTTCTTATG
TCCGTTTTTT GGGGAATATC AGTGGCTCGT CAAATCCGTA ACATCGCCAT CATCGCCCAC
GTGGATCACG GCAAGACCAC GCTGGTGGAT CAGCTCCTGC GCCAGTCCGG TACTTTTGCC
GCCCACCAGC AACTGGAAGA GCGGGTGATG GACAGCAACG ACCTGGAAAA GGAGCGCGGC
ATCACCATCA TGGCCAAGAA CACGGCGGTG CAGTGGGGCG ATACCCACAT CAACATCGTT
GACACCCCCG GCCATGCCGA TTTCGGCGCC GAGGTGGAGC GGGTGCTGGG TATGGTGGAC
GGCGTGTTGC TGCTGGTGGA TGCCGTCGAA GGCCCCATGC CGCAGACCCG TTTCGTCACC
CGCAAAGCGC TGGAACTGGG TCTCAAGCCG ATCGTGGTCA TCAACAAGGT GGATCGCCCC
GGCGCCCGCG CCGACTATGT CATCAGTGCC ACCCTCGACC TGTTCGACAA ACTGGGTGCG
ACAGAAGAGC AACTGGATTT TCCGGTGATC TATGCCTCCG GTCTGCAGGG CTATGCGGGG
GAAGATCCCG AAGTCCGCTC CGGTGACATG AAACCCCTCT TCGAAATGAT CCTCGATAAG
GTGGCGGCCC CGCAAGGGGA TCCCGAAGGT CCGTTGCAGA TGCAGATTGC CGATCTGGAT
TACTCCAGTT ATGTAGGGCG TATCGCGGTG GGTCGCATCC GTCGCGGTAC CATGCGTCCC
GGTCAGGATA TCGTGTTGAT TCACGGTGTC GATAAGACCC AGACCAAGGC GCGCATCCTT
CAGCTCCTCG GCTTCGACGG TCTCAAGCGG GTGCCGTGGG AAAGTGCCAC GGTGGGCGAC
ATCGTTGCGG TGACCGGCAT AGAAGATCCA TCCATCGGGG CCACCATCGC GGCGCCAGAA
GCGCCGGATG CCCTGCCGTG GAAACCCATC GATGAACCCA CCCTGAACAT GACGTTTCAG
GTCAATACCA GCCCCTTCGC GGGCAGGGAA GGCAAGTTTG TCACCAGTCG CCAGTTGCGC
GAGCGCCTGT ACCGCGAGTT GCTGACCAAT GTCGCCCTGC GGGTGGAAGA TACGGATAAC
GCCGATGTGT TCATGGTCTC GGGGCGCGGC GAGCTGCACC TGACCATTCT GGTGGAAAAC
ATGCGCCGCG AGGGCTACGA ACTGGCGGTA TCACGGCCCA GGGTGATTCA GCGCCAGGTG
GACGGCGTCT GGGAAGAGCC CTATGAAGCG CTGACCATCG ACCTGGAAGA ACAGCATCAG
GGCACCATCA TGGAACGCCT GGGTATCCGG CGCGGCGAGT TGCAGGACAT GATTCCCGAT
GGCCGGGGCC GCGTGCGGCT GGAGTACCGG ATTCCCGCAC GGGGTCTCAT CGGTTTCCAC
ACCGAATTTC TGACGGCCAC GTCCGGCACC GGAGTCATCA GCCATATTTT TGATAACTAC
GGCCCGGTGA AGGGCAGCAT CCCTTCCCGT AACAACGGCG TACTGATCTC TGCGGAAGAG
GGCGAAGTGG TTGGATTCGC CCTGTTTAAC CTGCAGGAAC GCGGCCGGAT GTTTGTGAGC
CCCGGCGACA AGGTCTACGA GGGCATGGTC ATTGGTATCC ATACCCGCGA CAACGATCTG
GTGGTCAACC CGCTCAAGGA AAAGAAGCTG ACCAATATGC GGGCATCGGG CTCAGACGAA
AACATCATGC TGACGCCGCC GATCAAGCTG ACGCTGGAGG CGGCGGTGGA GTTCATTGCG
GACGATGAAT TGGTAGAGGC GACGCCGCAG TCCATTCGCA TTCGCAAGCG TTATCTGACG
GAGAACGAGC GCAAGAAGGC GTCGCGCGGT GGCGGATAA
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| Protein sequence | MYTVIRKPAA GLVVPAFFLM SVFWGISVAR QIRNIAIIAH VDHGKTTLVD QLLRQSGTFA
AHQQLEERVM DSNDLEKERG ITIMAKNTAV QWGDTHINIV DTPGHADFGA EVERVLGMVD
GVLLLVDAVE GPMPQTRFVT RKALELGLKP IVVINKVDRP GARADYVISA TLDLFDKLGA
TEEQLDFPVI YASGLQGYAG EDPEVRSGDM KPLFEMILDK VAAPQGDPEG PLQMQIADLD
YSSYVGRIAV GRIRRGTMRP GQDIVLIHGV DKTQTKARIL QLLGFDGLKR VPWESATVGD
IVAVTGIEDP SIGATIAAPE APDALPWKPI DEPTLNMTFQ VNTSPFAGRE GKFVTSRQLR
ERLYRELLTN VALRVEDTDN ADVFMVSGRG ELHLTILVEN MRREGYELAV SRPRVIQRQV
DGVWEEPYEA LTIDLEEQHQ GTIMERLGIR RGELQDMIPD GRGRVRLEYR IPARGLIGFH
TEFLTATSGT GVISHIFDNY GPVKGSIPSR NNGVLISAEE GEVVGFALFN LQERGRMFVS
PGDKVYEGMV IGIHTRDNDL VVNPLKEKKL TNMRASGSDE NIMLTPPIKL TLEAAVEFIA
DDELVEATPQ SIRIRKRYLT ENERKKASRG GG
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