Gene Lferr_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2328 
Symbol 
ID6878322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2306461 
End bp2306958 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID642790187 
ProductTadE family protein 
Protein accessionYP_002220736 
Protein GI198284415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CCATGACAGG GGTCCATGAC CGGTCGGCGG AGCGGGGTCA GGCGGCCATC 
GAGTTCGCCA TCGTCTTCCT GCTCTTCTTC GCCATGCTCT GGGGCATCCT CACCTTCGGC
TTCATTTTCG CCGCCCAGAA CACCCTGACC CTGGCGGCGG AAAACGGCGC GCGGGCGGCC
CTGCGCTACC AGCCCGCCAC CACCACGGCC GGCGCCACCG CCGCGCGAAT CAGCGCGGCG
ACGACCATGG CGACCCAGAC CGTACAGTGG TTGCAGAACT TCACTCCTGC CTACGATCCG
GCGGCTTATC TCACGGCGAC TTCCGCGCCC TGCACCTATA ACGCCAACCT GATCTGCTTT
CATGTGCAGA TCAGCTACCC CTACGCGCAG CATCCGCTGA TTCCGCCTTT CCCGGGCTTC
GGCCTGTTCG CCCCCACGCA ACTGGTGGGC AAGGCGACCA TGCAGGTGGA TCCGGGCAAT
TTGTTGCCGG GGGGCTGA
 
Protein sequence
MTAAMTGVHD RSAERGQAAI EFAIVFLLFF AMLWGILTFG FIFAAQNTLT LAAENGARAA 
LRYQPATTTA GATAARISAA TTMATQTVQW LQNFTPAYDP AAYLTATSAP CTYNANLICF
HVQISYPYAQ HPLIPPFPGF GLFAPTQLVG KATMQVDPGN LLPGG