Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2324 |
Symbol | |
ID | 6878318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2301374 |
End bp | 2302708 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642790183 |
Product | type II secretion system protein E |
Protein accession | YP_002220732 |
Protein GI | 198284411 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACAGTCCCTT TGGCGCGCAG CCTTTCGATA TGGCCACCGC GAAGGCGTTG AACCAGCAGG ATGCCTACCA GCAGTTCAAA GGCTATCTGC ATCTGCGGCT CATCGACCGG GTCGAAGAGA TCGGCGCCGA TTTCGCGGAG CTGAGTCGTG GCGCCGTCTA TCGTTTCGTC TCGCTGGAAC TGGACCGCCT GATGCCGGAG CGCCCCTATC CGCTGAACGA AAAAGAAACC GAGGTGCTCA TCAACCAGCT CACCGACGAG CTGACTGGCT ACGGCCCGCT GGAAACGGCG CTCAAGGATC CCGAGGTCGA AGATATTCTG GTGAACGGAC CTCGTGAAAT CTATCTGGGA CGGAAAGGTA CGCTGGAGCA CAGTGATCTG GTGTTTCAGG ATGAAGCCCA TCTGATGCGT ATCATCTATC GTCTGTTGGG CGCCACCGGC AGACGGGTGG ACGAGTCGTC GCCGACCGTG GACGCGCGTC TGAGCAACGT GGGGCGCATC AATGTCGTGA TTCCGCCCCT GGCCCTGAAC GGACCGGTCA TTTCCATCCG GCGTTTCCCG GCACATCCGC TGCGCGCCGA GGATCTGATC GAGAAGGCCA CGCTCAATGC GCCCATCCTC CAGTTTCTGG AGTTCGCGGT GCGCGCGCGC TGCAACATCC TGGTATCCGG CGGCACCAGC AGCGGCAAGA CCACCTTCCT CAACGTCATC GCCAGCTTTA TCTCCGATGA GGAGCGGGTG GTGACCATCG AAGACACCGC GGAACTGCAA CTGCAGAGCA GGCATGTGGT GCGTCTGGAA AGCCGTCCCG GCGGGCATGA CGGGGCGGGC ACCGTCAACG TTCGCGATCT GCTGCGCAAC ACCCTGCGCA TGCGCCCCGA CCGGATCGTC GTCGGCGAGG TGCGCGGCGG CGAGGCCCTG GAGATGATGC AGGCCATGAC CACCGGCCAT GATGGTTCAC TGGGCACGAT CCACGCCAAC TCCCCCCGGG AGGCCTTGCA GCGCCTGGAA ATCCTGCTCA GCTTCGGCGG TTTTCCGGGC AATGAATCCA GCATGCGGCG GCAGATCGCT TCGGCCATCG ACCTCATCGT CCAGATCGAG CGTTTTCCCG ACGGGCGGCG CCGCATCACC TCCGTCACCG AAGTGACCGG CGTCGGCGAC AACATCATCG CCACCCAGGA GCATTTCCGT TACGAACCCC AGGTGAACCG GGAAAACAAG ACGGTCGACC GCTGGATATC CACGGGGATC AATCCGCGCA GTCCGAAACT CGCCAAGTAT CGTCCCGAAT CCTCCGAGAA GGATCAGTTC GGGTGGCTGG AATGA
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Protein sequence | MTDDSPFGAQ PFDMATAKAL NQQDAYQQFK GYLHLRLIDR VEEIGADFAE LSRGAVYRFV SLELDRLMPE RPYPLNEKET EVLINQLTDE LTGYGPLETA LKDPEVEDIL VNGPREIYLG RKGTLEHSDL VFQDEAHLMR IIYRLLGATG RRVDESSPTV DARLSNVGRI NVVIPPLALN GPVISIRRFP AHPLRAEDLI EKATLNAPIL QFLEFAVRAR CNILVSGGTS SGKTTFLNVI ASFISDEERV VTIEDTAELQ LQSRHVVRLE SRPGGHDGAG TVNVRDLLRN TLRMRPDRIV VGEVRGGEAL EMMQAMTTGH DGSLGTIHAN SPREALQRLE ILLSFGGFPG NESSMRRQIA SAIDLIVQIE RFPDGRRRIT SVTEVTGVGD NIIATQEHFR YEPQVNRENK TVDRWISTGI NPRSPKLAKY RPESSEKDQF GWLE
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