Gene Lferr_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2292 
Symbol 
ID6878286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2263762 
End bp2264277 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID642790151 
ProductGrpE protein 
Protein accessionYP_002220700 
Protein GI198284379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0174464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG AAAAAGAGGA ATCGCCGTCT ACCGAAGCGG AAGGTGCCGG TGCGGAAGTG 
GTGAACTGGG AAGAGCGGGC GGAAACCTAC CGCAACGATT ATTTGCGCGC CCTGGCGGAT
ATCGAAAATC TGCGCAAACG TCATGAAAAG CAGGTGGAAG ATGCCCGTAA TTATGCGGTG
GACCGCTTTG CCCGCGAACT GCTGCCGGTG GTGGACAGTC TGGAACTGGC GCTGGCCAGC
CCGGTGGAGG GCGCGGAGAG CATCGCGCTA TTGCGGCAGG GTTTGGAAAA CACGTTGACG
CTGTTCGCCA AGGCCTTGGG AAAGGCCGGC ATCGCCCCCA TAGAGATGGG CGAAGGCCGT
TTTGACCCCC ACCTGCATCA GGCGATTGCC ATGGTGGAAA CGGAAGGGGA AGCAAACCGG
GTTCTGGCGG TGCATCAGAA AGGTTATGTG ATGCATGACC GGCTGTTGCG ACCGTCCATG
GTGTCGGTGT CCAAGGCACC CAAAGCGGCA CAATGA
 
Protein sequence
MNEEKEESPS TEAEGAGAEV VNWEERAETY RNDYLRALAD IENLRKRHEK QVEDARNYAV 
DRFARELLPV VDSLELALAS PVEGAESIAL LRQGLENTLT LFAKALGKAG IAPIEMGEGR
FDPHLHQAIA MVETEGEANR VLAVHQKGYV MHDRLLRPSM VSVSKAPKAA Q