Gene Lferr_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2275 
Symbol 
ID6878269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2249339 
End bp2249773 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID642790135 
Producthypothetical protein 
Protein accessionYP_002220684 
Protein GI198284363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000390537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAAA ATATTTTCCG CATCCTATGG GTGCTTACCG CCGTGGTGTT GAGCATGGTG 
ATAGCGCCGG TCGGCGCAGC GGTGGACCAC CCGCTGCAGC TTGCCATGAA CAATTACAGT
ATGGCCAAAA TGGCTAGTGG TAGCGGAACT TCCGTTTCCG GAAAGAAATA TATAAAAATA
TTATCACCAG CTAACGGTTC AAGAATCAAC GCTAGGACTC CCGTTGTCAT ATCGTATGAC
GTTACCCTGG CCCCTGGCGG AAACCACATT CATTTCTATG TCGACAACCA CTTTAAAGGC
CTTACGCACG AGTTGAAAGG CAGTTTTTCT CTGGGTACCA TGGCTCCTGG GATACATACT
ATTTGCATTA AGGAAGCCAC GGTGGCACAT GTCCTTATTG GGGTAAACCG ATGCATCACC
GTTACAGTGA AGTAA
 
Protein sequence
MSQNIFRILW VLTAVVLSMV IAPVGAAVDH PLQLAMNNYS MAKMASGSGT SVSGKKYIKI 
LSPANGSRIN ARTPVVISYD VTLAPGGNHI HFYVDNHFKG LTHELKGSFS LGTMAPGIHT
ICIKEATVAH VLIGVNRCIT VTVK