Gene Lferr_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2264 
Symbol 
ID6878258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2239109 
End bp2241955 
Gene Length2847 bp 
Protein Length948 aa 
Translation table11 
GC content60% 
IMG OID642790125 
Productribonucleoside-diphosphate reductase, alpha subunit 
Protein accessionYP_002220674 
Protein GI198284353 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.98665e-09 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTAAAC CTACCACCCA GGCCGTCATC GGTAACCCTG CCTACGACCC TTCCGAAGCC 
AGTCATTACA AAGTCATTCG TCGCAACAAC GCGATGGTCA ATTTTGACGC CAGCAAGATT
CATATCGCTG TGACGAAGGC CTTCCTGGCC GTGGAAGGCG GCAGCGGGGC GGCAAGCGCG
CGCGTTCGTG ACCTCGTCAG CCGCCTGACG GAACAGGTGA TTGAAGCACT GAAACGGCGC
CAGCCGGGGG GCGGCACCTT TCACATCGAA GACATTCAGG ATCAGGTGGA ACTGGCGCTC
ATGCGTGCCG GCGAACACGA AGTCGCCAGG GCCTATGTAC TTTATCGCGA GGAGCGCGCG
CGGGAACGCC GCCAGCAAGC TGCGGCGGAA ACCCCAGCCG ACGTCCCGGT TATTCGGGTC
AGCTATCCGA ACGGCAGCCA GCGGGCACTG GACATGGTAC GATTGCGCGC CGTCATCGAC
GAAGCCTGCA GCGGCCTGGG CACCGCCGTG TCGATAGACG CCATTCTCGG CAACACCGTC
AAAAATCTCT ACGACGGTAT CAGTGAGGAT GAGTTGTTTC AGGCCCCCAT TCTGGCCAGC
CGGGTGCTGA TCGAGCGCGA TCCCGCCTAC GCCTACGCCT CGGCACGTCT GCTTCTCGAC
CGCGTGCGCT GGGAAGTGCT CGGTGAAGCC GCGACGCAGG CGGAGATGAC CGCACGTTAT
CCCCAGTATT TCCGCGACTA TCTGCAAACC GGCATCCAGA ATGAGCTGAT CGACCCGCGC
CTGGGACAGT ATGATCTGGA ACGCATCACC GCCGCGCTCC GGCCGGAGCG GGATCTGGAC
TTCCAGTATC TGGGCATGCA GATTCTGTAT GACCGCTACT TCTTGCATGT ACGGGAGCGC
CGCATCGAGT TGCCGCAAGC CTTCTGGATG CGGGTGGCCA TGGGTCTGGC GATGAATGAA
GTCGACCGCG AAACCCACGC CATCGCCTTT TACGAAGTGC TGTCCAGCTT CGACTTCGTC
AGTTCGACGC CCACCCTGTT CAACGCCGGA ACCTTGCGCC CGCAGTTGTC CAGTTGCTTC
CTGACCACCG TGGGTGACGA CCTGGATGAC ATCTACGAAG CCATCAAAGA AAACGCCATG
CTCTCCAAGT TCAGCGGCGG GCTGGGGAAC GACTGGACGC CGGTGCGTGC GCTGGGCTCC
TTCATCAAAG GCACCAATGG CAAGTCGCAG GGCGTCGTTC CCTTCCTCAA AGTGGTCAAC
GACACGGCGG TGGCGGTCAA TCAGGGCGGC AAGCGCAAAG GCGCGGTCTG CGCCTATCTG
GAAACCTGGC ACATGGATAT CGAGGAATTC CTCGAACTGC GCAAGAATAC CGGCGACGAC
CGCCGCCGCA CCCACGATAT GAATACCGCC AACTGGATCC CCGACCTCTT CATGGAACGC
GTCGAGAACA ACGCCATGTG GACGCTGTTC AGCCCCAACG AAACACCGGA TTTGCACGAC
CTCACCGGGT CGGCGTTTCG GGAGCGCTAT GAGCACTATG AGCGCATGGC GGATGCGGGC
GGCATCGAGT TGTTCAAGCG CATACCAGCC ATTCATCTCT GGCGCAAAAT GCTGACCATG
CTCTTCGAGA CCGGCCATCC CTGGATCACC TTCAAGGACC CCTGCAACCT GCGCAGCCCG
CAGCAGCACG TTGGGGTGGT GCACAGCTCC AACCTCTGCA CCGAAATCAC CCTCAATACC
AACGCCAAAG AGATTGCCGT CTGCAACCTG GGGTCCGTCA ACCTGGTATC CCATTTACGG
GCAGTGGCGG ACGCCGGCGC ATTGCGCGAG GACAGCACGC CGGAAGAACT GCTCGCCATG
ATGGATGGGG AAAAGTTGCA CCACACCATC CGCGTTGCCA TGCGGATGCT GGATAATGTC
ATCGACATGA ACTACTACGC CGTCGCCAAG GCGCGCAACA GCAATCTGCG GCACCGGCCG
GTGGGCCTGG GGCTGATGGG CTTCTCCGAT GCCCTGTTAC AGATGCGGAT TCCTTACGCT
TCGGCAGCAG CCCTCGCCTT TGCCGACATC AGCCAGGAAG TCATTTCCTA CCATGCCATC
GATGCATCGG CCGATCTCGC CCGGGAACGG GGCAGCTATC AGAGCTTCCC AGGGTCCCTG
TGGAGTCAGG GTATCCTGCC CATCGACAGC ATCGACCTGC TCGCGGCCGG CCGTGAGCAC
GGCGTGGACG TGGACCGCAG CCAGCATCTG GACTGGGCAA CACTGCGTAG CAAGGTACGG
GGCGGCATGC GCAACAGCAA TTGCCTGGCC ATTGCGCCCA CCGCCACCAT CTCCAATATT
GTCGGTGTCA GCCAGGGTAT TGAACCGATT TACCAGAACC TCTATGTCAA ATCCAACCTG
TCCGGCGAGT TTACGGTGGT GAACAGCTAT CTGGTTCACG ACCTGAAACG CCTGGAACTC
TGGGATGAGG TCATGGTCAA TGATCTGAAA TACTTCGATG GCTCGGTCAT GCCCGTAGAC
CGCATTCCGG CCAGCATCAA GCCCCTGTAT GCCAACGCTT TTGAAACCGA CCCGGAATGG
CTGGTGGAAG CGGCGGCGCG GCGGCAGAAA TGGCTGGATC AGGCCCAGAG TCTCAACCTC
TATTTCGGCC AGCCTTCCGG CAAGAAAATT GACGAGATCT ACCGGCTGGC CTGGAAACGC
GGCCTGAAGA CCACCTACTA CCTGCGCTCA CTGGGCGCCA CGGCAGCGGA AAAATCGACG
GTGCAGACGG GCACCCTCAA TGCGGTCGTA TCAGGTCAAC CCAAAGCCTG CGCGATCGAC
GATCCGACTT GTGAGGCCTG TCAGTGA
 
Protein sequence
MSKPTTQAVI GNPAYDPSEA SHYKVIRRNN AMVNFDASKI HIAVTKAFLA VEGGSGAASA 
RVRDLVSRLT EQVIEALKRR QPGGGTFHIE DIQDQVELAL MRAGEHEVAR AYVLYREERA
RERRQQAAAE TPADVPVIRV SYPNGSQRAL DMVRLRAVID EACSGLGTAV SIDAILGNTV
KNLYDGISED ELFQAPILAS RVLIERDPAY AYASARLLLD RVRWEVLGEA ATQAEMTARY
PQYFRDYLQT GIQNELIDPR LGQYDLERIT AALRPERDLD FQYLGMQILY DRYFLHVRER
RIELPQAFWM RVAMGLAMNE VDRETHAIAF YEVLSSFDFV SSTPTLFNAG TLRPQLSSCF
LTTVGDDLDD IYEAIKENAM LSKFSGGLGN DWTPVRALGS FIKGTNGKSQ GVVPFLKVVN
DTAVAVNQGG KRKGAVCAYL ETWHMDIEEF LELRKNTGDD RRRTHDMNTA NWIPDLFMER
VENNAMWTLF SPNETPDLHD LTGSAFRERY EHYERMADAG GIELFKRIPA IHLWRKMLTM
LFETGHPWIT FKDPCNLRSP QQHVGVVHSS NLCTEITLNT NAKEIAVCNL GSVNLVSHLR
AVADAGALRE DSTPEELLAM MDGEKLHHTI RVAMRMLDNV IDMNYYAVAK ARNSNLRHRP
VGLGLMGFSD ALLQMRIPYA SAAALAFADI SQEVISYHAI DASADLARER GSYQSFPGSL
WSQGILPIDS IDLLAAGREH GVDVDRSQHL DWATLRSKVR GGMRNSNCLA IAPTATISNI
VGVSQGIEPI YQNLYVKSNL SGEFTVVNSY LVHDLKRLEL WDEVMVNDLK YFDGSVMPVD
RIPASIKPLY ANAFETDPEW LVEAAARRQK WLDQAQSLNL YFGQPSGKKI DEIYRLAWKR
GLKTTYYLRS LGATAAEKST VQTGTLNAVV SGQPKACAID DPTCEACQ