Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2263 |
Symbol | |
ID | 6878257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2237339 |
End bp | 2238784 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790124 |
Product | peptidase U62 modulator of DNA gyrase |
Protein accession | YP_002220673 |
Protein GI | 198284352 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00176392 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000093987 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGCCT CAGCCCTGGA AATTGCCCGC GCTACCCTTT TTGCACCTGG CGGAATCAGC GAAGGGGCGT TGGAAAAGGT GTTCGGTCGC CTCTCCCATC GCGCCCTGGA TGATGCGGAT CTGTATTTTC AGTACAGCCG CAGCGAGGGC TTTAGCCTGG AAGAAGGGGT CGTGAAGTCA GGCAGTCACT CCATTGAACA GGGAGTGGGT GTGCGGGCGG TGAGCGGTGA GCGTCAGGGG TTGGCCTATT CTGACGAAAT CGCGGTTGAT GCCTTGTTGA CGGCGGCGGA TGCGGCGCGC GCCATTGTCC ATCGTCCGGG TCAGACGAAA GGACTGGTCT GGCAGCAGCG TCCGGGGCTG GCACTATATC CGCCGGTCGA TCCTCTGGCT TCCATTTCCA ATAGCGAGAA AATCGCCCTG CTGGAACGGG TGGAACGGGC CGCCCGGGCC TGTGATCCGC GCATCGTCCA GGTGATGGCC AGCCTCAATG CCCGCTTCGA GGCGGTGCTG GTGGCGCGTC TCGACGGTAC GATGGCTGCC GATGTGCGTC CTTTGGTGCG CCTCAACGTC TCCGCCATCG CCGAGCAGGG CGGGCGGCGT GAGCAAGGCA GCGCCGGCGG CGGCGGCCGT TACGATTATC AGGCCTTTCT TCAGGGCGAC ATGGCCGAAG GCTTCGCCCG GGAAGCCGCG CGTCAGGCGC TCGTCAATCT GGAGGCGGAG GCGGCCCCTG CCGGCACCAT GGAAGTGGTC CTCGGGCCGG GATGGCCGGG CGTGCTGCTG CATGAGGCAA TTGGCCACGG ACTGGAGGGG GACTTCAATC GCAAGGGCAC CAGCGCCTTC AGCGGCCGGG TCGGCCAGCG GGTCGCCGCG CCGGGCGTCA CCGTCGTGGA TGACGGCACG CTCGATGGGC GCCGCGGGAG TCTGAATGTC GATGACGAAG GGACTCCGAC TCAGTGCACG ACACTGATCG AGGATGGCAT TCTCAAAGGT TATCTGCAGG ACACCCTGAA CGCGCGTTTG ACCGGGACGC GTTCGACCGG TAATGGACGC CGCGAGTCTT ACGCGCACTT GCCGATGCCG CGGATGACCA ATACCTATAT GCGGGCCGGG GACCGCGATC CCCGGGAAAT CATCGCCAGC GTCAAACGCG GGCTCTACGC CGTCAACTTT GGGGGCGGTC AGGTGGACAT CACCAACGGC AAATTCGTTT TTTCCGCATC GGAAGCATAT CTGATTGAAA ACGGTAAGAT AACCAGGCCT GTCAAAGGCG CGACCCTGAT CGGCAACGGC CCGGATGTGC TCACCAGGGT TGAAATGATC GGCAACGACC TCCAGATGGA TACGGGAGTG GGCACTTGTG GTAAGGATGG CCAGAGTGTA CCCGTAGGTG TTGGACAGCC GACGCTGAAA ATCCGTGATC TGACGGTGGG GGGAACGCAG GGTTGA
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Protein sequence | MTASALEIAR ATLFAPGGIS EGALEKVFGR LSHRALDDAD LYFQYSRSEG FSLEEGVVKS GSHSIEQGVG VRAVSGERQG LAYSDEIAVD ALLTAADAAR AIVHRPGQTK GLVWQQRPGL ALYPPVDPLA SISNSEKIAL LERVERAARA CDPRIVQVMA SLNARFEAVL VARLDGTMAA DVRPLVRLNV SAIAEQGGRR EQGSAGGGGR YDYQAFLQGD MAEGFAREAA RQALVNLEAE AAPAGTMEVV LGPGWPGVLL HEAIGHGLEG DFNRKGTSAF SGRVGQRVAA PGVTVVDDGT LDGRRGSLNV DDEGTPTQCT TLIEDGILKG YLQDTLNARL TGTRSTGNGR RESYAHLPMP RMTNTYMRAG DRDPREIIAS VKRGLYAVNF GGGQVDITNG KFVFSASEAY LIENGKITRP VKGATLIGNG PDVLTRVEMI GNDLQMDTGV GTCGKDGQSV PVGVGQPTLK IRDLTVGGTQ G
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