Gene Lferr_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2263 
Symbol 
ID6878257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2237339 
End bp2238784 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content63% 
IMG OID642790124 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_002220673 
Protein GI198284352 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00176392 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.3987e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGCCT CAGCCCTGGA AATTGCCCGC GCTACCCTTT TTGCACCTGG CGGAATCAGC 
GAAGGGGCGT TGGAAAAGGT GTTCGGTCGC CTCTCCCATC GCGCCCTGGA TGATGCGGAT
CTGTATTTTC AGTACAGCCG CAGCGAGGGC TTTAGCCTGG AAGAAGGGGT CGTGAAGTCA
GGCAGTCACT CCATTGAACA GGGAGTGGGT GTGCGGGCGG TGAGCGGTGA GCGTCAGGGG
TTGGCCTATT CTGACGAAAT CGCGGTTGAT GCCTTGTTGA CGGCGGCGGA TGCGGCGCGC
GCCATTGTCC ATCGTCCGGG TCAGACGAAA GGACTGGTCT GGCAGCAGCG TCCGGGGCTG
GCACTATATC CGCCGGTCGA TCCTCTGGCT TCCATTTCCA ATAGCGAGAA AATCGCCCTG
CTGGAACGGG TGGAACGGGC CGCCCGGGCC TGTGATCCGC GCATCGTCCA GGTGATGGCC
AGCCTCAATG CCCGCTTCGA GGCGGTGCTG GTGGCGCGTC TCGACGGTAC GATGGCTGCC
GATGTGCGTC CTTTGGTGCG CCTCAACGTC TCCGCCATCG CCGAGCAGGG CGGGCGGCGT
GAGCAAGGCA GCGCCGGCGG CGGCGGCCGT TACGATTATC AGGCCTTTCT TCAGGGCGAC
ATGGCCGAAG GCTTCGCCCG GGAAGCCGCG CGTCAGGCGC TCGTCAATCT GGAGGCGGAG
GCGGCCCCTG CCGGCACCAT GGAAGTGGTC CTCGGGCCGG GATGGCCGGG CGTGCTGCTG
CATGAGGCAA TTGGCCACGG ACTGGAGGGG GACTTCAATC GCAAGGGCAC CAGCGCCTTC
AGCGGCCGGG TCGGCCAGCG GGTCGCCGCG CCGGGCGTCA CCGTCGTGGA TGACGGCACG
CTCGATGGGC GCCGCGGGAG TCTGAATGTC GATGACGAAG GGACTCCGAC TCAGTGCACG
ACACTGATCG AGGATGGCAT TCTCAAAGGT TATCTGCAGG ACACCCTGAA CGCGCGTTTG
ACCGGGACGC GTTCGACCGG TAATGGACGC CGCGAGTCTT ACGCGCACTT GCCGATGCCG
CGGATGACCA ATACCTATAT GCGGGCCGGG GACCGCGATC CCCGGGAAAT CATCGCCAGC
GTCAAACGCG GGCTCTACGC CGTCAACTTT GGGGGCGGTC AGGTGGACAT CACCAACGGC
AAATTCGTTT TTTCCGCATC GGAAGCATAT CTGATTGAAA ACGGTAAGAT AACCAGGCCT
GTCAAAGGCG CGACCCTGAT CGGCAACGGC CCGGATGTGC TCACCAGGGT TGAAATGATC
GGCAACGACC TCCAGATGGA TACGGGAGTG GGCACTTGTG GTAAGGATGG CCAGAGTGTA
CCCGTAGGTG TTGGACAGCC GACGCTGAAA ATCCGTGATC TGACGGTGGG GGGAACGCAG
GGTTGA
 
Protein sequence
MTASALEIAR ATLFAPGGIS EGALEKVFGR LSHRALDDAD LYFQYSRSEG FSLEEGVVKS 
GSHSIEQGVG VRAVSGERQG LAYSDEIAVD ALLTAADAAR AIVHRPGQTK GLVWQQRPGL
ALYPPVDPLA SISNSEKIAL LERVERAARA CDPRIVQVMA SLNARFEAVL VARLDGTMAA
DVRPLVRLNV SAIAEQGGRR EQGSAGGGGR YDYQAFLQGD MAEGFAREAA RQALVNLEAE
AAPAGTMEVV LGPGWPGVLL HEAIGHGLEG DFNRKGTSAF SGRVGQRVAA PGVTVVDDGT
LDGRRGSLNV DDEGTPTQCT TLIEDGILKG YLQDTLNARL TGTRSTGNGR RESYAHLPMP
RMTNTYMRAG DRDPREIIAS VKRGLYAVNF GGGQVDITNG KFVFSASEAY LIENGKITRP
VKGATLIGNG PDVLTRVEMI GNDLQMDTGV GTCGKDGQSV PVGVGQPTLK IRDLTVGGTQ
G