Gene Lferr_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2242 
Symbol 
ID6878234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2214602 
End bp2215102 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content51% 
IMG OID642790101 
Producttranslation initiation factor IF-3 
Protein accessionYP_002220652 
Protein GI198284331 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.66118e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00531509 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATATCA ATCGGGAAAT TACCGCAGCG CGGGTCCGGT TGATAGGTGT CGAGGGAGAA 
CAGTTAGGTG TGTTATCCTT TATGGAAGCC ATCGCGGCTG CAGAAGAGGC TGAACTGGAT
CTCGTCGAGA TCGCTCCGCA AGCCGATCCT CCCGTATGCC GGATCATGGA CTACGGAAAG
TTTCGTTTTC AGGAAAGTAA GCGCCAGCAT GATGCAAAAC GCCGGCAGAA ACAGACACAG
GTGAAGGAAA TTAAATTCCG CCCGCGTACG GATGACGCCG ACTACCAGAT CAAGTTGCGC
AATATTTTGC GTTTTATTGA AGATGGAGAT CGTGCGAAAA TTACGTTGCG CTTTCGCGGT
CGTGAAATGT CGCATCCCGA ATTGGGTATG GAGTTGCTCA ATCGGGTAGA AAGGGATTTA
ACGGAAGTGG GTGTGGTTGA ACAACGGCCA CGCATGGAAG GGCGACAAAT GGTGATGATT
GTCGCGCCGC GGAAAAAATA G
 
Protein sequence
MNINREITAA RVRLIGVEGE QLGVLSFMEA IAAAEEAELD LVEIAPQADP PVCRIMDYGK 
FRFQESKRQH DAKRRQKQTQ VKEIKFRPRT DDADYQIKLR NILRFIEDGD RAKITLRFRG
REMSHPELGM ELLNRVERDL TEVGVVEQRP RMEGRQMVMI VAPRKK