| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2237 |
|---|
| Symbol | |
|---|
| ID | 6878229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2210256 |
|---|
| End bp | 2210555 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642790096 |
|---|
| Product | integration host factor, alpha subunit |
|---|
| Protein accession | YP_002220647 |
|---|
| Protein GI | 198284326 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0376768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGTTA CCAAAGCTGA AATTGTAGAC ATGCTGTTTG AGAGTATGGG CCTGAACAAG
CGGGAAGCCA AAGGTATCGT TGAGGCCCTA TTCGACGGTA TCCGTGAGAA TCTGGCCAAA
GGCGAAGAGG TGAAGCTGTC CGGATTTGGC AATTTTACGT TACGTGATAA GAACCCCCGC
CCCGGACGTA ACCCGAAGAC CGGTGTGGAG ATTACCATCA CGGCGCGGCG TGTGGTGACG
TTCCATCCGA GCCAGAAGCT CAAAGCCTAC GTGAATGGTA GCGAACCAGA CAACGCATAG
|
|---|
| Protein sequence | MAVTKAEIVD MLFESMGLNK REAKGIVEAL FDGIRENLAK GEEVKLSGFG NFTLRDKNPR
PGRNPKTGVE ITITARRVVT FHPSQKLKAY VNGSEPDNA
|
|---|
| |