| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2209 |
|---|
| Symbol | glyQ |
|---|
| ID | 6878200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2187237 |
|---|
| End bp | 2188121 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642790067 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_002220619 |
|---|
| Protein GI | 198284298 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.193617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTC AGGAAATCAT CCAGCGGCTG CAAGGCTTCT GGGCCGATCA AGGCTGTGTT
CTGCTCCAGC CCATGGATAT GCCGGTAGGT GCCGGAACCT TCCACCCCGC CACCTTTTTG
CGGGCCATCG GCCCAGAACC ATGGCGGGCT GCTTACGTAC AGCCCTCCAG GCGTCCCACG
GACGGCCGTT ATGGGGACAA TCCCAATCGT CTCCAGCACT ACTACCAGTT TCAGGCGGTG
CTCAAACCAA ACCCGGTGAA CCTGCAGGAA CTCTACCTCG AATCGCTGGC GGCCCTCGGT
ATTGATTCCG GGGTCCAGGA TATCCGTTTC GTCGAAGACG ACTGGGAGTC CCCAACCCTG
GGGGCCTGGG GGCTGGGCTG GGAGGTCTGG CTGAATGGCA TGGAAGTCAC CCAGTTCACT
TATTTCCAGC AGGTGGGCGG TCTGGATTGC CATCCCGTGA TGGGCGAGGT CACCTATGGT
CTGGAACGAC TGGCCATGTA CCTGCAGGGC GTCGAAAGCG TCTATGACCT TGTGTGGACC
CCGAACGTAC TCTACGGGGA CGTATTCCAT CAGAACGAAG TGGAACAATC GCGCTATAAT
TTTGAACTGG CGCCCGTGGA AGACCTCTTT CAGCGCTTCG ACCAGGCGGA AAAAGACTGT
CACGCATTGC TGGCAGCCGA ACTCCCTTTA CCCGCCTACG AACGGGTGCT GGACTGCTCC
CATACCTTTA ACCTGCTGGA CGCACGCCAT GCCATCGGCG TCAACGAGCG CGCTCGATTC
ATCGGCCGCG TCCGTACGCT TGCGCGAGGT GTGGCCGAGC ACTACGCCGA CGCCCGTGCC
GCCCTCGGCC ACCCCCTGCT GAGGAGCCAA GATGTCAGCG CCTGA
|
|---|
| Protein sequence | MTFQEIIQRL QGFWADQGCV LLQPMDMPVG AGTFHPATFL RAIGPEPWRA AYVQPSRRPT
DGRYGDNPNR LQHYYQFQAV LKPNPVNLQE LYLESLAALG IDSGVQDIRF VEDDWESPTL
GAWGLGWEVW LNGMEVTQFT YFQQVGGLDC HPVMGEVTYG LERLAMYLQG VESVYDLVWT
PNVLYGDVFH QNEVEQSRYN FELAPVEDLF QRFDQAEKDC HALLAAELPL PAYERVLDCS
HTFNLLDARH AIGVNERARF IGRVRTLARG VAEHYADARA ALGHPLLRSQ DVSA
|
|---|
| |