Gene Lferr_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2180 
Symbol 
ID6878171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2161615 
End bp2162934 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID642790038 
Producthypothetical protein 
Protein accessionYP_002220590 
Protein GI198284269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.40383e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGCCT CAACGCTCAC ATCACATCAG CAAGCCAGCC TGCACCGTAT TGAGGTGCGG 
CCCATCCTGC CCACAGAGCG GGAACGCTGG AATACCCTGA TGCAAGCGCA TCATTATCGC
GGCTTCCGCA CAATGGCGGG ACGCACCCTG CGCTACGTGG CCACGCTGGA TGACCGCTGG
GTAGCGCTCC TCGGCTGGCA GGCCGCCGCT TACCAGTGTC AGGCGCGGGA GCAGTGGATC
GGCTGGTCCT GGGTCTTGCG CCGCCAGCGC CTGCACCTCA TCGCCAATAA TGCCCGCTTT
CTGATCCTGC CGAGGGAGTC CTTTCCCAAC CTGGCTTCCC GTATTCTTTC CCTGAACCTC
CGCCGACTTT CTGCTGACTG GCAGTCGGTC TACGGTCACC CCATCGTGCT GGCCGAGACC
TTCGTGGAAT CGCCTCGTTT TACTGGCGCC TGCTACCGGG CCGCAAACTG GGTGGACGTC
GGCTGGACCA AGGGCTTTGC CCGCCGTCCC GGCGCAGGCT ATGTCTACCA CGGTCAGCCC
AAACGGCTTC TGCTCTATCC CCTTCACCCC CAGGCGCGTA TCTGGCTTGC CCAGCCGCAG
CCACAATCCG AATGGACGAA AACCCCTATG CAAACCGTCA CCCTGAGCGA TGCGCAAATG
GAAGGCTTGC GCCAAATTTT CTTTCGCCTG CCCGATGCCC GCAGCCGTCT GGGCAAGCAG
CATCCTCTCC CGGCCATTCT GACCATAGCC GTGGCCGCCG TCCTCACCCA GGCCCAAAGC
TATATCGCGA TGGCCGAGTG GGCCGCCCGG CTGACCCAAG CGCAACTGAA GCGTATCCGC
GCCCGATTCA ATCCCAGGAC GCAACGCTAT GTGGCGCCTT CCGAACCGAC CCTGCGTCGC
GTCCTGCAAG GCGCCAACGT CACGGCACTG GATGCCGCTA TCGGTGCCTG GCTGCTGGGT
ATCGCCGGAT TTGAAGCCGT GGCTGTCGAT GGCAAAGTGC TCAAAGGCGC GGTTCGGGAA
GATGGGTCCC AGGTCCATCT CCTCAGCGCT TTCATGCACG GCCAGGGAGC CACCATTGCA
CAAAAAGAAA TCGCCCGGAA AACCAACGAA ATCCCGGAGC TGCGCAGCCT GCTCAAAGAC
GTCGACATCC AGGACAAGGT CGTCACCGCC GATGCTCTGC ATACCCAGCG AAAGACCGCT
CGATTCCTCG TTGAAGACAA AAAGGCCGAT TATCTCTTCA CCGCCGTCAA AGGCAATCAG
CGAAAACTCC GCAACAGCCT GATATGCCTC CCTTGGGGCG ATTTCCCCCC TCAGCGCTGA
 
Protein sequence
MEASTLTSHQ QASLHRIEVR PILPTERERW NTLMQAHHYR GFRTMAGRTL RYVATLDDRW 
VALLGWQAAA YQCQAREQWI GWSWVLRRQR LHLIANNARF LILPRESFPN LASRILSLNL
RRLSADWQSV YGHPIVLAET FVESPRFTGA CYRAANWVDV GWTKGFARRP GAGYVYHGQP
KRLLLYPLHP QARIWLAQPQ PQSEWTKTPM QTVTLSDAQM EGLRQIFFRL PDARSRLGKQ
HPLPAILTIA VAAVLTQAQS YIAMAEWAAR LTQAQLKRIR ARFNPRTQRY VAPSEPTLRR
VLQGANVTAL DAAIGAWLLG IAGFEAVAVD GKVLKGAVRE DGSQVHLLSA FMHGQGATIA
QKEIARKTNE IPELRSLLKD VDIQDKVVTA DALHTQRKTA RFLVEDKKAD YLFTAVKGNQ
RKLRNSLICL PWGDFPPQR