Gene Lferr_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2178 
Symbol 
ID6878169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2160219 
End bp2161130 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content55% 
IMG OID642790037 
ProductCoB--CoM heterodisulfide reductase 
Protein accessionYP_002220589 
Protein GI198284268 
COG category[C] Energy production and conversion 
COG ID[COG2048] Heterodisulfide reductase, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.77327e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTAAGG TTGCATATTA TCCGGGCTGT GCGCTGGAAG GTTCCGGCGG ACCCTATGAC 
AAATCCACCC GCGTTCTGGT GAAGGAACTG GGTCTGGAAA TGGAAAACCT CGAGGACTAC
AACTGCTGTG GTGCGATGGA GGTAAAGAAC ATTCATCCCA TGTTGCAGAC CTATATGTCG
GCGCGGAATC TGGCCATCGC CAGTAAGCTG CAGGGCTGTG ATACGGTGAT GGCGCCTTGT
AACGGCTGCT ATCGTAATTT GAAGCAGACC GAATATGAAT GTGCTACTTC AGAAGAAACC
ATGAAGACGG TGCAGGAACT CGCCAACAAG TCGGGTGACC CTGTTTATGA AGGCGACGTG
CGCAGCCTGC ACGCGCTGGA ATGGTTCATG GAGGAAGTGG GTGTCGATGG CATCAAAAGC
AAGGTCAAAA AGAGTCTCAA CGGCCTGAAG ATCGCCAACT ACTATGGTTG CATGTACACC
CGTCCCCGGC AGATTTTCCC GGAAAAGGAT CAGGGTCCCG GTTCGGAATC GAGCTATGCG
CCGCATTTCA TGGATGACCT GCTCGCAGCA GCCGGTGCCG TGAGCGTGGA TTTCCCCTTG
AAGACGGCAT GTTGTGGTGG GGCGCATACG TTGTCGGATT CGGATACTTC CACCCAGTTG
GTGCTGAATA TCCTTCAGGC GGCGGAAGAT GCCGGTGCGG AGGTGATCGC CACCGAGTGT
CCCACCTGCC ATTCCGGTCT GGAAATGCAT CAGATCCGTG CGGAGACGGA GTTCGGCATC
AAATCGAGCG TCAAGGTGAT TTATTTCACC CAGTTGCTCG GTTTGGCCAT GGGTCTGTCT
GCGCGCAAGG TAGGCATTCC CGACAATGTC AGCGACTCGA TGGATCTTCT TGCCGCCAAG
GGCATTATCT GA
 
Protein sequence
MAKVAYYPGC ALEGSGGPYD KSTRVLVKEL GLEMENLEDY NCCGAMEVKN IHPMLQTYMS 
ARNLAIASKL QGCDTVMAPC NGCYRNLKQT EYECATSEET MKTVQELANK SGDPVYEGDV
RSLHALEWFM EEVGVDGIKS KVKKSLNGLK IANYYGCMYT RPRQIFPEKD QGPGSESSYA
PHFMDDLLAA AGAVSVDFPL KTACCGGAHT LSDSDTSTQL VLNILQAAED AGAEVIATEC
PTCHSGLEMH QIRAETEFGI KSSVKVIYFT QLLGLAMGLS ARKVGIPDNV SDSMDLLAAK
GII