Gene Lferr_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2175 
Symbol 
ID6878166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2158816 
End bp2159253 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID642790034 
Productglycine cleavage H-protein 
Protein accessionYP_002220586 
Protein GI198284265 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.81106e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGAACTG TACGTGGCTG TGAAATCCCC GAAGATCTGC TGTACAACGT CGAGAATAAC 
GTGTGGCTGC GCAAGGAAGA CGATGGCACT GTGACCATCG GCATGACCTC CTATGCCTGT
GCGTTGGCTG GACAGATCGT TTCCTATACA CCCAAGGGCG CTGGCAAGGA GATCAAGAAG
GACAAGTCCG CAGCAACGGT GGAGTCCGGC AAGTGGGTTG GCCCGTTGAA GAGTCCCGTC
AGCGGTACGG TGGTGTCGAG CAATGACGAT GTGGCCAAGG AGCCGGGCCT CATCAACAAG
GATCCCTATG GAAGCGGCTG GATTGCCAAG CTGACGCCCG CTGATTTTGC AGGCGATGCC
GGTGAACTGA AGACCGGCGC CGATGCTTTG GCGGCATTCG AAGCAAAGAT GACGGCTGAT
GGTTTTGGCG GCTGCTGA
 
Protein sequence
MGTVRGCEIP EDLLYNVENN VWLRKEDDGT VTIGMTSYAC ALAGQIVSYT PKGAGKEIKK 
DKSAATVESG KWVGPLKSPV SGTVVSSNDD VAKEPGLINK DPYGSGWIAK LTPADFAGDA
GELKTGADAL AAFEAKMTAD GFGGC