Gene Lferr_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2173 
Symbol 
ID6878164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2156491 
End bp2157561 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID642790032 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_002220584 
Protein GI198284263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID[TIGR00545] lipoyltransferase and lipoate-protein ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.679039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.26509e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAACGT ATAACGCCAA GGACTGGCTC GTGGTCGATA CGGGCGTGCG CCCGGCCGAC 
GAAAATATGG CCTTGGACAA GACGTTGCTC CTGGCAATGT CCGAAGGACA GATTCCCAGC
ATTTTCCGTT TCCTGCGCTT TGAGGAATCC GCGCTGGTCG GTTATCACCA ATCACCGGAG
CAGGAACTCA ACCTGGAGTT CTGTCGTGAG CAGGGGATCG CCGTGCAGCG TCGTCTTACC
GGCGGCGGCG CACTGATTTT TGATCCCACC CAGATAGGCT GGGAACTGGT TTGTCGGCGG
GACGCGCTAC CCCAGGGCGA TATGGCCTCG CTGTCGCAGA GAATCTGTGA AGCGGCGGCG
GCTGGCTTAT CGCTTCTTGG GGTGAGCGCA CGGTTTCGCC CGCGCAACGA CATCGAGGTG
GAAGGGCGGA AAATTTCGGG TACCGGCGGG ATTATGGATG GCAATGTGCT GCTCTTTCAG
GGGACGGTGC TGGTCGATCT GGATATTCCG CGGATGTTGC GCGTACTGCG GGTGCCGCTG
GAGAAACTGA ATGCCCATGC CATCTCTTCG GTGGCGGAAC GGGTGACCAG CTTGAAGGCC
TTGTTGGGTA AAGCGCCGGA GTTGACGGCG GTACAGAAGG CCTTACTGGA TGGTTTCCGC
GCGCATTTGG GGCTGTCTTT CGTCCGGGGC GACCTGCCGG ATGCCGTGGC CGCGCTGTTG
CCGGAGGCAT TGGCGGAGGT GCGTGACGCG GACTGGCTTG GCATCAACCG CCGCGCGCGC
GACGATATGC CGCTGCGTAA AGCGACCTTG CGCGCCCCCG GTGGCACGCT GCAAGCAGAA
ATGCTCTGGG ATAGTTATGG GAACCGAGTG CGGCAGGTTC ACTTCAGCGG TGATTATTTT
GTCCAGCCCC GGCGCGCTAT CGTCGATCTG GAGGCGGCGC TGCGTAATGT CCATCTGAAC
GACGTGGACG GTGTTATCGA GGGATTGTTC GAGAAGCAGG CTGTCGATGG CTTCGGCTTA
CAGCCGGAGC ATTTCGCGAC GGTATTGCGG ATGGCGGCAA AAGACGCGTG A
 
Protein sequence
MTTYNAKDWL VVDTGVRPAD ENMALDKTLL LAMSEGQIPS IFRFLRFEES ALVGYHQSPE 
QELNLEFCRE QGIAVQRRLT GGGALIFDPT QIGWELVCRR DALPQGDMAS LSQRICEAAA
AGLSLLGVSA RFRPRNDIEV EGRKISGTGG IMDGNVLLFQ GTVLVDLDIP RMLRVLRVPL
EKLNAHAISS VAERVTSLKA LLGKAPELTA VQKALLDGFR AHLGLSFVRG DLPDAVAALL
PEALAEVRDA DWLGINRRAR DDMPLRKATL RAPGGTLQAE MLWDSYGNRV RQVHFSGDYF
VQPRRAIVDL EAALRNVHLN DVDGVIEGLF EKQAVDGFGL QPEHFATVLR MAAKDA