Gene Lferr_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2152 
Symbol 
ID6878143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2136363 
End bp2138711 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content62% 
IMG OID642790011 
Productferrous iron transport protein B 
Protein accessionYP_002220563 
Protein GI198284242 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.264076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000442692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACT GTCATGGAAC ACCACAGCGT AACCCGGGGT CGGCCAGGTT GCCGGTCATC 
GCCCTGGCGG GTAACCCGAA TTGCGGCAAA ACCACCCTTT TCAATCTGCT GACCGGCGCT
CATCAGCATG TGGGCAACTG GCCCGGCGTC ACTGTGGAGC GGCGCAGCGG CACTATGACC
CTGGGCCGCC GCAAAATCTC GGTGGTAGAC CTTCCCGGTA TCTACAGTCT GATGGGGGGT
GGCGGAGAAG ATCAGCGGGT GGCGCGCGAT TTCCTATTGG ATAGTGATAT CGAACTGATC
GTCAATATCG TCGACGCCTC CAATCTGGAG CGGCACATGG CGCTGACCGC CGAGCTTCTG
GAAACAGGGC GCCCGATGGT TCTGGTCCTG AACATGGTCG ACGAGGCGGA AGCCCACGGT
CTGCAGGTAC GCAGCCATGA ACTCTCGGCA GCCATGGGTA TTCCGGTCAT CCCCACGGTA
GCCCGGAAAG CCAGGAGCCG CATCAGCCTG ATGGAGGCCC TGACCCAGGC ACTGGATCAC
CCCGCCCTGG GAAACATGCT CGATTATGGC CAGCTTATCG AAGCGGCACT CACCGCTCTC
GGCACCCTGC TGCCCGGTGA CCCACCCGCT CACCGGCGCT TTACCGCTCT GTGCCTGCTG
GAAGGGAACA TCGACCCGGC CGACCCAAAA ACGCAGCATG CCCTGCGACA GATCAGCAGC
GAACTCGCAG GAACGAGCGA TGAAACCCCT GCCGACCTGA TCATGGACCG GCGCTTCGCC
TGGGCGCAGG AAATGGCGAC CATTGCGTTG CACCGCCAGG GTCCGGCCGG GCTCCGTCAA
AAAATCACCG ACCGACTGGA TCGGGTGGTA TTGAACGACT GGCTGGGCGT ACCGGTTTTT
CTGGCGGTAC TGTATCTGGT TTTCGTCGTC AGCTTCAGTG GCGGCAATGT CTTCCTGGAC
TTCTTCGATC AGGCCTCGGC AGCACTGCTG ATCCATGGCG TCGGTCACGT GCTGCTCGGC
GCCGGGCTGC CCACCTGGCT GGTCTCCATC ATCGCCGGTG GTATCGGCGG CGGGCTGAAT
CTGGTGATTT CCTTCATCCC ACCCATCGGC CTCACTTTTC TCTTTCTCGC CTTTCTGGAC
GATTCGGGCT ACATGGCCCG CGCCGCCTAC GCCATGGACC GCCTGATGCG CCGTATGAGC
TTACCCGGCA ATGCCCTGGT GCCCATGGTC ATCGGCTTCG GCTGCAATGT ACCCGCCATC
ATGGGCTCGC GCATCATCGA AGACCCGCGG GGGCGCATTC TGACCGTGCT GATGCAGCCC
TTCATGTCCT GCTCCGCACG CCTGACCATT TACATGGCCT TTGCCGTCGT GTTTTTCCGC
AGCAACGGCG GCCAGGTGGT CTTTGCCCTC TATGTGCTGG GGATCATCGT TGCTCTACTG
ACGGCGTGGC TACTTGGCAA AACCGCCCTG CGCGGCGAGG TGCTGCCCTT CGTCATGGAA
CTGCCACCCT ATCGCCTGCC CAGCTTCCGC AGCGTGTTTC TCCAGGCCTG GCAGCGCCTG
AAGGTGTTTA TCTTCCGGGT GGGTCGGGTG ATTGCGGTCA TCGGCGTCGT GCTCTTTATT
CTCCCTGGCA TCGGCTGGAC GGATCGCGGT CTGCGCAGCA CCGACATCGA CCATTCCCTG
CTAGCCCAGG GTAGCCGCGC GCTGGTCCCG ATTTTTGAAC CCATGGGCAT TCATCAAGAC
AACTGGCCCG CCATTTCCGG CCTGATTGCC GGAGCGGCCG CCAAGGAGAT CGTGATCGGC
ACCCTCAACG GCATTTATCA GCGGCAGAAT GCAGCCGACC TGATGGCGGA CTACCGCGAT
CCCGACATCG CCGGGCAACT CCTGGGCGCG ATCAAAACCA TCCCCGCCAA CGCGGTTACT
TTTTTTACCA CACTGGATGA TCCGCTCGGC CTCTCGGCCA TGGACTCCAC GGGTACCGCC
GAACAGGCCT CCGGTGCCGA AAGCGCCACC CTGCAAGCCA TTGCGGCCGG ATTCACCCCC
CTCTCCGCCT TTGCTTATCT GGTCTTTGTG CTGCTTTATG TACCCTGCGC CAGCACCATG
GGGGCACTGC GCCGGGAAGT CGGATGGGGA TGGATGAGCT TCTCCCTGCT TTATGGCACC
GGCCTGGCCT GGAGCGCCAG CACGGTGATT TACCAGTCGG GTACCTTCGC CAAACATCCC
GGCTATTCTG CGGCATGGAT CGCGGGAGTA TTGGCGGCTT TTGCCTTGCT GGTTGTCGGT
CTGCGGCTTT ATGGACAACG CAGCGACGCC CTATCCAAGC CATCTCAGCA CCGAAGGGCG
TCGGCATGA
 
Protein sequence
MSDCHGTPQR NPGSARLPVI ALAGNPNCGK TTLFNLLTGA HQHVGNWPGV TVERRSGTMT 
LGRRKISVVD LPGIYSLMGG GGEDQRVARD FLLDSDIELI VNIVDASNLE RHMALTAELL
ETGRPMVLVL NMVDEAEAHG LQVRSHELSA AMGIPVIPTV ARKARSRISL MEALTQALDH
PALGNMLDYG QLIEAALTAL GTLLPGDPPA HRRFTALCLL EGNIDPADPK TQHALRQISS
ELAGTSDETP ADLIMDRRFA WAQEMATIAL HRQGPAGLRQ KITDRLDRVV LNDWLGVPVF
LAVLYLVFVV SFSGGNVFLD FFDQASAALL IHGVGHVLLG AGLPTWLVSI IAGGIGGGLN
LVISFIPPIG LTFLFLAFLD DSGYMARAAY AMDRLMRRMS LPGNALVPMV IGFGCNVPAI
MGSRIIEDPR GRILTVLMQP FMSCSARLTI YMAFAVVFFR SNGGQVVFAL YVLGIIVALL
TAWLLGKTAL RGEVLPFVME LPPYRLPSFR SVFLQAWQRL KVFIFRVGRV IAVIGVVLFI
LPGIGWTDRG LRSTDIDHSL LAQGSRALVP IFEPMGIHQD NWPAISGLIA GAAAKEIVIG
TLNGIYQRQN AADLMADYRD PDIAGQLLGA IKTIPANAVT FFTTLDDPLG LSAMDSTGTA
EQASGAESAT LQAIAAGFTP LSAFAYLVFV LLYVPCASTM GALRREVGWG WMSFSLLYGT
GLAWSASTVI YQSGTFAKHP GYSAAWIAGV LAAFALLVVG LRLYGQRSDA LSKPSQHRRA
SA