Gene Lferr_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2101 
Symbol 
ID6878092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2093910 
End bp2095979 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content60% 
IMG OID642789965 
ProductK+-transporting ATPase, B subunit 
Protein accessionYP_002220517 
Protein GI198284196 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.542927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCTA CCCATCATAA ACATGCGGCA TCTCCGATCA ACTGGAAAGA TCAGGGCCGG 
GGCGCCCTGT GGGACAGCTT CAGCATGCTC TCCCCGCGTC GCCAGTTGCG CAATCCGGTG
ATGTTCGTCG TCTACGTCGG CTCCTGGCTG CTGCTGGCCC TCTTTTTTCA CGATCTAATC
GTGCATAACA GTGAAGCGCC TTTTACCGCT GTGATCGACC TCTGGCTCTG GCTCACACTG
ATTTTTGCCA ATTTTGCCGA AGCGCTGGCC GAGCGTCAGG GCGAGGCCCA GGCCAACAGT
TTGCGGCAGA GCCGGCAGGA AGTTACGGCC AAAAAACTGC CGAAACCGGT GCGCGAGGCG
AGCTATAAGG AGGTTCCCGG CGCCAGCCTG CGCAGCGGCG ACTTTGTCCT GATAGAAGCG
GGAGACCTCG TCCCCACCGA CGGCGAGGCG GTGGCGGGAG TCGCCGCCGT CGATGAAAGC
GCCATCACGG GCGAGAGCGC GCCCGTCATC CGCGAAAGCG GGGGTGATCG TAGCGCGGTC
ACCGGCGGTA CCCGGGTGAT CTCGGACTGG CTCATCATCC GGGTGACGCA GGAGGCCGGA
CACACCTTCC TCGACAAAAT GATCGCCATG GTGGAGGGGG CATCGCGACG CAAAACCCCT
AACGAAATCG CTCTAAGCAT ACTGTTGGTC GTTTTGACGC TCGTTTTTCT GGTGGTCACC
GTCACCATTT ATCCGTTTTC CTGGTATAGC GTCCATTACG CCAGCCACTC CGGATCGGTG
ATCAGCCTGA CGGTGCTGGT AGCCTTGCTG GTCTGCCTGA TTCCCACCAC CATCGGAGCG
CTATTACCCG CTATCGGTAT TGCCGGCATC GTGCGCTTGC TGCAGAGCAA TGTGGTGGCG
ACTTCCGGGC GTGCCATCGA GGCGGCGGGT GACGTGGATG TGCTGCTTCT CGATAAAACC
GGCACCATTA CCTACGGCAA CCGATCCGCA GCGGCGTTTT ACCCCGTTTT AGCGGTTACC
CAGGAAATCC TCGCGCAGGC GGCCCGCCGC GCCTCTTTGG CCGATGAGAC GCCGGAGGGC
AAAAGTATCG TGACCCTTGC CGACAAACAT TACCCGCAAA GCCGGGAAGC CTTGCCACTG
GAAGCCCAAT TGATCCCTTT TACTGCCGAA ACCCGCATGA GTGGGGTGGA CTGGAATGGG
CAGCAATTGC GTAAGGGATC TCCCGACGCC ATGAAGGCGT GGGTCCAGTC GCTGGGGGGC
ACCTGGCCTA ACGAGCTGGA CGGCATAGTG CAGGAAATCG CGGGGGGTGG CGCAACACCC
CTGGTGGTCT GCTCTGGCGC AGCGGTATTG GGTGCCATCG AGTTGCGGGA CATCGTCAAA
GCCGACATCA AATCGCGCTT TGCCGAATTG CGGGCGATGG GTATCCGCAC CGTCATGGTG
ACCGGCGACA ATCCGTTGAC TGCCGCCGCC ATTGCCGCTG AAGCGGGGGT CGATGATTAT
CTCGCGGAAG CCAAACCGGA AACCAAGCTC GCGCGCATTC GAGAATACCA GAATGAGGGT
TACATGGTCG CGATGACCGG GGACGGCACC AACGATTCCC CAGCCCTGGC CCAGGCGGAT
GTCGGTCTCT GCATGGCCAG TGGTACCCAG GCGGCGCGCG AAGCCTCCAA CATGGTCGAC
TTGGACTCCA ATCCCACCAA ACTGCTGGAG ATCGTCCAGA TCGGCAAGCA ACTGCTGATG
ACCCGCGGCG CCCTCACCAC CTTCAGTGTG GCGAACGATG TGGCCAAATA CTTCGCCATC
ATCCCGGCGG CGTTTGTATC GACTTATCCC CAATTGGGCG AGCTGAACAT CATGGATTTG
AGCTCGCCTA CCCATGCCAT CATGGCCGCA GTCATCTTTA ACGCGCTCAT CATCCCCTTT
CTGATTCCAC TGGCCCTCAA GGGGATCAAG TTCCGCGCGG ACTCGGCGCA GCACATCCTG
CGCCGCAACG TGTGGATCTA CGGATTGGGC GGCATTATTG CGCCATTTAT CTTCATCAAG
CTGATCGACA TGCTGCTGGT TGTACTGTAG
 
Protein sequence
MESTHHKHAA SPINWKDQGR GALWDSFSML SPRRQLRNPV MFVVYVGSWL LLALFFHDLI 
VHNSEAPFTA VIDLWLWLTL IFANFAEALA ERQGEAQANS LRQSRQEVTA KKLPKPVREA
SYKEVPGASL RSGDFVLIEA GDLVPTDGEA VAGVAAVDES AITGESAPVI RESGGDRSAV
TGGTRVISDW LIIRVTQEAG HTFLDKMIAM VEGASRRKTP NEIALSILLV VLTLVFLVVT
VTIYPFSWYS VHYASHSGSV ISLTVLVALL VCLIPTTIGA LLPAIGIAGI VRLLQSNVVA
TSGRAIEAAG DVDVLLLDKT GTITYGNRSA AAFYPVLAVT QEILAQAARR ASLADETPEG
KSIVTLADKH YPQSREALPL EAQLIPFTAE TRMSGVDWNG QQLRKGSPDA MKAWVQSLGG
TWPNELDGIV QEIAGGGATP LVVCSGAAVL GAIELRDIVK ADIKSRFAEL RAMGIRTVMV
TGDNPLTAAA IAAEAGVDDY LAEAKPETKL ARIREYQNEG YMVAMTGDGT NDSPALAQAD
VGLCMASGTQ AAREASNMVD LDSNPTKLLE IVQIGKQLLM TRGALTTFSV ANDVAKYFAI
IPAAFVSTYP QLGELNIMDL SSPTHAIMAA VIFNALIIPF LIPLALKGIK FRADSAQHIL
RRNVWIYGLG GIIAPFIFIK LIDMLLVVL