Gene Lferr_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2023 
Symbol 
ID6878014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2026180 
End bp2026680 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content56% 
IMG OID642789895 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_002220447 
Protein GI198284126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT ATTCAGCAGA ACGTAAGGCT GCTGTATTGC AGAAGATGTT GCCGCCCACC 
AGTTTGTCCG TGGCGGAACT GGCCAAACAG GAAGGGATTT CTGATGTTAC GCTGTACCAT
TGGCGCAAGC AGGCCATAGC GAGTGGGGCG ATGAGTGCAG TGACCAAGAA GACAGCAGAG
GGTTGGTCTG CCGAGTCCAA GTTGGCAGCG GTGGTGGAAA CGGCCCTGCT GTCCGAGGTG
GAGTTGAGCC AGTATTGCCG GGAGAAAGGG CTGTATCCAG ACCAGGTAAA AGCGTGGAAA
CAGGCATGTA TCGTTGGACA GCAGACCGCC ACCCAACAGA AACAGACAGC GGGTGCGCAA
GCCCGTGCAG ACCAGAAACG GATTCGTGAG CTGGAGCGGG AACTGCGTCG CAAAGACAAG
GCCTTAGCCG AGGCGGCTGC GCTGTTGATC TTGCGAAAAA AATTGAACGC CCTCTGGGGG
GACGACGCCG GGGAAGATTA A
 
Protein sequence
MKHYSAERKA AVLQKMLPPT SLSVAELAKQ EGISDVTLYH WRKQAIASGA MSAVTKKTAE 
GWSAESKLAA VVETALLSEV ELSQYCREKG LYPDQVKAWK QACIVGQQTA TQQKQTAGAQ
ARADQKRIRE LERELRRKDK ALAEAAALLI LRKKLNALWG DDAGED