Gene Lferr_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1997 
Symbol 
ID6877987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1995601 
End bp1996026 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID642789868 
ProductRhodanese domain protein 
Protein accessionYP_002220421 
Protein GI198284100 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.885175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATA AAATTCTTTT CTTTATCGAG TCGCAGTGGC CCTTGCTGCT TGGGGCCGTG 
GCGCTGATCA TCATGATTTT CAAGGGGCCA TTGACGCGGA GGGCGGCGGG TATCCATGAA
GTAGACCCGG CGACCGCGGT ACAGTTGATC AACCATGAAG ATGCGGTAAT CATCGATGTG
CGGGAGCAGA AAGAATGGTC GCAGGGGCAT CTGCCCGGTG CCCGGCACAT TCCTCTGGGT
GACTTGCCCA AATATATGCA GGATCTGGAG AAGCATCGTG GTCATCATAT CATCTGTCAG
TGTGCGAGTG GCATGCGTTC GTCGCGCGCC GCGGCCAGCC TGAAAAAAGC CGGCTTTGAC
AAGATTTACA GTCTGAGAGG CGGGATCGGC GCGTGGCGGA GTGCCGGTCT GCCGGTAGAG
AAGTGA
 
Protein sequence
MDHKILFFIE SQWPLLLGAV ALIIMIFKGP LTRRAAGIHE VDPATAVQLI NHEDAVIIDV 
REQKEWSQGH LPGARHIPLG DLPKYMQDLE KHRGHHIICQ CASGMRSSRA AASLKKAGFD
KIYSLRGGIG AWRSAGLPVE K