Gene Lferr_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1995 
Symbol 
ID6877985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1994852 
End bp1995286 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content57% 
IMG OID642789866 
Productthioredoxin 
Protein accessionYP_002220419 
Protein GI198284098 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG TGATATTGCT TTGTCCTGCC TGCGGCGCCG TCAATCGGGT GCCCAAAGAG 
CGTTTGGGGG AGAACCCCAA GTGTGGCAAA TGCCACGCAC AGATTTTTCC TGACCACCCC
GTCAATCTCA GCAGTAGCAG TTTTTCCCAG TATATCCAGA AAAACGAATT GCCGGTGTTG
GTCGATTTCT GGGCCCCCTG GTGCGGGCCC TGCCGAACCA TGGCACCGCA GTTTGAGCAG
GCGGGTCGGG CGATGCGGGG GCGTGTGCTC TTTGCCAAGG TGAATACCGA AGATGAACCG
CAAATCGGTA ACCGCTTCCA GATTCGTTCC ATCCCCACCA TGGTGCTTTT CAAGGCCGGA
AAAGAACTGG CGCGGATGAG CGGCGCCATG AGTGCAGCGG AACTTCAGCG CTGGTTGACA
GGACAGGGAG TCTGA
 
Protein sequence
MTSVILLCPA CGAVNRVPKE RLGENPKCGK CHAQIFPDHP VNLSSSSFSQ YIQKNELPVL 
VDFWAPWCGP CRTMAPQFEQ AGRAMRGRVL FAKVNTEDEP QIGNRFQIRS IPTMVLFKAG
KELARMSGAM SAAELQRWLT GQGV