| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1988 |
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| Symbol | |
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| ID | 6877977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1984446 |
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| End bp | 1988297 |
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| Gene Length | 3852 bp |
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| Protein Length | 1283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789858 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_002220412 |
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| Protein GI | 198284091 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC TTCGCGGCTC TGCGGCGCTG TCCGCCTTTC GTGTGCAACA CTTGCTGCGC
ATCCTCGTCG CCGAGGGCTT TCCCGTCCAG AGCGCAGTCG CTCAATACGT CCATCTGATG
GATCTCGGCG CGCCCCTGAG GTCGGCAGAA ATGGGGGTGC TGACGGCTTT GCTGCGTTAC
GGGGAACCTG CTGAAGGAGA TGCAGAGGAC GCCCAGGAAG TTTGCGTGGT GCCCCGCCTC
GGGACCATCT CGCCATGGTC CAGCAAGGCG ACGGATATTG CCGGACACTG TGGATTGGGT
GCGGTGCGGC GTATTGAACG AGGGGTTTCG TATCGCTTGC GCAAAGTCGG CGGTGCGGCC
TTCAGCGTGG CGGAGTTACA GGCGATGAGC GGGCTTTTGC ACGATCCCAT GACCGAGTCG
GTGTTGCCGG ACTGGGCGGC GGCAGAGGCC ATTTTTGCCC ACCCAGAACC CGCAGCGCTG
GTCCGCATTC CTCTGCGCAA AGAGGGACGT GCCGCCTTGC TTTCGGCCAA TAACCGTATG
GGGCTCGCTC TCGCTCCGGC GGAACTGGAT TATCTGTTTG ATTATTTTTC CGGCTTGGGC
CGCGATCCCA GTGATGCCGA GCTGATGATG TTTGCGCAGG CCAACTCCGA GCATTGTCGG
CACAAGGTGT TCAATGCGGC CTTCCGGCTG GATGGCCAGG ATCAGGCCCT CAGCCTCTTC
GCCATGGTTC GCGAAACGCA CCGTCTGCAT CCGCAGGGTA CGCTATCTGC CTATAAGGAC
AATGCCGCGG TCATGGCGGG TGGCGCGCTC AGTCGGCCTT TCGCGGTGAG CGCGTCGGGA
GCGTATGCCG TAGCGGAAGA GCGCACCGCC ATCCTGATGA AAGTGGAAAC CCACAACCAT
CCGACGGCCA TTTCGCCTTT TCCCGGAGCG GCCACGGGGA GTGGCGGCGA GATTCGCGAC
GAGGGCGCCA CCGGGCGGGG CGGGAAGCCC AAGGCGGGTT TGACTGGATT CTCGGTATCG
CATCTGCGGA TTCCCGGCTA TATCCAGTCA TGGGAGTCGA ATCCTTACGG AAAGCCGGCG
CGTATCCGCT CCGCGCTGGA CATCATGCGC GAAGGCCCTC TGGGTGCTGC GGCCTTCAAC
AACGAATTCG GCCGCCCGGC CATTGCCGGC TATTTCCGGG TCTTCGAATG TGATCAGGAC
GGGCTGCACC GCGGCTACCA CAAACCCATC ATGCTCGCCG GCGGTCTGGG GCAGATTCGC
CCCTTGCTGG TGGAGAAGAA GCCTCTGCCG GAAGGTGCCA AGGTGCTGGT TATCGGCGGC
CCGGCCATGC TCATCGGTCT GGGTGGTGGC GCCGCATCCA GTGTGGCCAG CGGGGCAGGG
GACGAGCAAC TGGATTTTGC CTCGGTGCAG CGCGGCAATC CGGAAATGCA GCGCCGGGCC
CAGGAAGTGA TCGAGCGCTG TATTGCCCTG GGAGAGGATT CCCCCATTTT ATCCATCCAT
GATGTCGGGG CGGGCGGGCT CTCCAACGCC ATTCCCGAGT TGTTGCACGA TGGTGGTCGT
GGCGGCCGTC TGCAACTGCG GGCGGTACCC AATGAAGAAC AGGCCATGTC ACCCATGCAG
ATCTGGAGTA ATGAGGCGCA GGAGCGTTAT GTGCTGGCCG TGGCGGCAGC AGACTTGCCG
CGTTTCACGG AGATCTGCGC CCGCGAGCGC TGCCCCTGTG CAGTCCTGGG AGAAGCCACG
GCGGCGGACG CCCTGATTCT GGAGGATTCC CTGCTCCATG ACCGGCCGGT GGATATGGCC
CTCAGCGCCC TGCTGGGTTG CCCGCCGCGC ATGGAGCGGG ACAGTCGGCA TGTGCAGCCC
GATTTGCGAC CGCTGGATCT GTCCGGCGCC GACCTGCGCG CTGCCGCCTA TGCCGTCCTG
CGCCATCCCT CGGTGGCCAG CAAGGAATTC CTCATCACCA TCGGTGACCG CAGCGTCGGC
GGCCTGATTC ACCGCGACCA GATGGTGGGG CCATGGCAGG TGCCGGTGGC CGATTGCGGC
GTTACTGCCG CGGACTTCTG GAATGACCAC GGCGAGGCCA TGGCCATCGG CGAACGTGCC
CCGGTGGCGG TATTGAATCC TGTAGCCAGT GCCCGGTTGG CCATTGCCGA AGCCCTCACC
AATCTTTTTG CCGCCGATGT GGCCGCGCTG GGAGATATCA AACTCTCGGC CAACTGGATG
GCGGCGGCGG ATCATCCAGG AGAAGACGCG GCGCTCTATG ACGCGGTACG TGCTGCGGCA
CTGGAGCTCT GTCCGGCGCT GGACCTTGCC ATCCCGGTGG GCAAAGACTC CCTATCCATG
CGCACTATCT GGCGAGAGGA GGGCGTGGAA AAGACCGTCG TGTCGCCCCT GTCGGTGATC
ATCTCGGCCT TCGCGCCCGT GGCGGATTTG CGGAAGAGCT GGACCCCTCA ATGGTCTGCT
CAACCCGATA CGGATCTCTG GCTGGTGGAC TTGGGGTGCG GCCGGCTCGG CGCTTCCATT
CTGGCCCAGA CTTTGGGGCA GATGGGCGAT AGTACGCCTG ATCTGGATGC TCCCGAGTTG
ATTCGAGGCC TGTTCTCCGC ATTGCAGGCG TTGCGTGTGC AGGAACTGGT GCTGGCCTAC
CATGATCGCT CCGACGGTGG TCTCTGGGCG ACCCTCTGCG AAATGTCTTT CGCCAGCCGT
TGTGGGGCGG ACATTCAACT GCCTTCGAGG GCGGATCGCT GGTCCTTCCT TTTTGCCGAG
GAACCGGGAG TGGTCATTCA GACCCCAGCC GCCCAGCGCG AGCACATAAT GCAGATTTTT
GCCGATGCCG GCCTCGCTGG ACGGGCTCAG GTCATTGGTC AGGTAAAGGC CGAACACTGG
CGTTTACAAA TACAGCAGGA CGGCCAATCC GTTCTGAATG AAGCTGTAGC TGAACTACTG
CATGTCTGGG CGGAGACCAG CTACCGGATG CAGGCCCTGC GCGATGATCC GCTTTGTGCC
CAGGAGTCCT TTGCTATGGT GGCCAGCCCA GATGCGCCGC TGTTTTCTCG CCTGTCCTTT
TGCCCGCAGA TGCCGATGAT TCAGAGCGGG GCCAGGCCCC GCGTGGCGAT CCTCCGGGAG
CAGGGTGTCA ATGGTCAGAT CGAGATGGCG GCGGCTTTCC ATCGTGCCGG TTTTACCGCC
GTGGACGTGC ATATGAGCGA CCTTGCGGCC GGTCGTCATC GCTTACCGGA TTTCCAGGCA
ATGGCCGCTT GCGGCGGCTT TTCCTACGGA GATGTGCTGG GCGCCGGTGC GGGCTGGGCC
AAATCGATCC TTTTCCATGA TCGTCTGCGG GACGATTTCG CCGCCTTCTT TGCCGATACC
TCGCGCCTCG CCCTGGGCGT TTGCAATGGC TGTCAGATGT TGGCAGAGTT GCGCGATATT
ATCCCCGGCG CAGCGCACTG GCCGCGTTTT GCACGCAATC GCTCGGAGCA GTTCGAAGCG
CGGCTGGCCA TGGTCGAGGT CGTGGATTCG CCGTCGCTGT TATTTGCGGG TATGGCGGGC
ACTTATGCGC CCATCGTTAT TGCCCACGGC GAAGGGCGGG CGCACTTCGC CGGGGATCAG
CCTGGCTCAG GACCTGTTAC CATGCGCTTT GTGGATGCCC AGGGACAGCC GGCAGTGCAG
TATCCAGCCA ATCCCAACGG CTCCCCGCAA GGCGTTACCG GTCTCTGTAA TGAGGACGGT
CGGGTGTCTA TCCTCATGCC TCATCCCGAA CGGGTGGTGC GTAGCCTGCA GCTGAGCTGG
CGGCCGCCGG AGTGGGGTGA GGCTACACCC TGGATGCAGA TTTTTGTCAA CGCGCGGAAG
GCGTTGGGAT AA
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| Protein sequence | MLLLRGSAAL SAFRVQHLLR ILVAEGFPVQ SAVAQYVHLM DLGAPLRSAE MGVLTALLRY
GEPAEGDAED AQEVCVVPRL GTISPWSSKA TDIAGHCGLG AVRRIERGVS YRLRKVGGAA
FSVAELQAMS GLLHDPMTES VLPDWAAAEA IFAHPEPAAL VRIPLRKEGR AALLSANNRM
GLALAPAELD YLFDYFSGLG RDPSDAELMM FAQANSEHCR HKVFNAAFRL DGQDQALSLF
AMVRETHRLH PQGTLSAYKD NAAVMAGGAL SRPFAVSASG AYAVAEERTA ILMKVETHNH
PTAISPFPGA ATGSGGEIRD EGATGRGGKP KAGLTGFSVS HLRIPGYIQS WESNPYGKPA
RIRSALDIMR EGPLGAAAFN NEFGRPAIAG YFRVFECDQD GLHRGYHKPI MLAGGLGQIR
PLLVEKKPLP EGAKVLVIGG PAMLIGLGGG AASSVASGAG DEQLDFASVQ RGNPEMQRRA
QEVIERCIAL GEDSPILSIH DVGAGGLSNA IPELLHDGGR GGRLQLRAVP NEEQAMSPMQ
IWSNEAQERY VLAVAAADLP RFTEICARER CPCAVLGEAT AADALILEDS LLHDRPVDMA
LSALLGCPPR MERDSRHVQP DLRPLDLSGA DLRAAAYAVL RHPSVASKEF LITIGDRSVG
GLIHRDQMVG PWQVPVADCG VTAADFWNDH GEAMAIGERA PVAVLNPVAS ARLAIAEALT
NLFAADVAAL GDIKLSANWM AAADHPGEDA ALYDAVRAAA LELCPALDLA IPVGKDSLSM
RTIWREEGVE KTVVSPLSVI ISAFAPVADL RKSWTPQWSA QPDTDLWLVD LGCGRLGASI
LAQTLGQMGD STPDLDAPEL IRGLFSALQA LRVQELVLAY HDRSDGGLWA TLCEMSFASR
CGADIQLPSR ADRWSFLFAE EPGVVIQTPA AQREHIMQIF ADAGLAGRAQ VIGQVKAEHW
RLQIQQDGQS VLNEAVAELL HVWAETSYRM QALRDDPLCA QESFAMVASP DAPLFSRLSF
CPQMPMIQSG ARPRVAILRE QGVNGQIEMA AAFHRAGFTA VDVHMSDLAA GRHRLPDFQA
MAACGGFSYG DVLGAGAGWA KSILFHDRLR DDFAAFFADT SRLALGVCNG CQMLAELRDI
IPGAAHWPRF ARNRSEQFEA RLAMVEVVDS PSLLFAGMAG TYAPIVIAHG EGRAHFAGDQ
PGSGPVTMRF VDAQGQPAVQ YPANPNGSPQ GVTGLCNEDG RVSILMPHPE RVVRSLQLSW
RPPEWGEATP WMQIFVNARK ALG
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