Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1986 |
Symbol | |
ID | 6877974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1982319 |
End bp | 1983074 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789855 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002220410 |
Protein GI | 198284089 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.368291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATGCCT CTCTGTCCTA CGCCACGCTG ATCCAAAATC CATTGCTCTG GGCCATCGCG GGGGTGATCA TTCTGGTCGC CTTTTATGTC CGCGCAGTGA TCGGCTTTGG CTCCGGATTG ATTTCCGTGG CGCTGCTGAC GCTTATTTTC CCCATCAAAG AAGTAGTGCC CGTGGTGCTG CTGCTGGATC TGCTCGGTTC CGTATTGCTC GGCGCCTATG ACTTCCGGGA AATGCGCTGG CCGGAGTTGC GCTGGCTGAT TCCCGGCAGC CTGATCGGGC TGGCTTTCGG CTCCTTTATC CTCGCCGATA CCAATGCCCA GAATCTTACT CGCTTTCTCG GCGTGTTCAT TCTCGCCTAT GTCTGTTATG CGCTGCTCAT GAAGCCTGAG CGACTACCCC AGGTCGCCTT GCCCTGGGGA ATGCCGCTGG GAATTTTCGG TGGGGTGGTG GGCAGTTTGT ATGGCGGCGG AGGTCCGCCC ATTGTCGCCT ATCTGCAAAT GCGTCATCTC GACAAGCGCG CCTTTCGCGC CACGTTTCAA GGTATCGCCC TTACGGACAA TATTCTGCGG GCCTTTATGT ACATAGCGCT GGCCCTGCTG ACCTGGCAAC TGACGGTGGG TTTTTTCCTG CTGATTCCAC CGGTGCTGCT CGGTCTGTGG ACAGGTAATC GCTTACATCT GCGCATCAAT CAAAGGACTT TTCTCATGGG GACCCTCGCA GTACTCGCAG TGGTCGGTTT GAAATATCTC ATCTGA
|
Protein sequence | MHASLSYATL IQNPLLWAIA GVIILVAFYV RAVIGFGSGL ISVALLTLIF PIKEVVPVVL LLDLLGSVLL GAYDFREMRW PELRWLIPGS LIGLAFGSFI LADTNAQNLT RFLGVFILAY VCYALLMKPE RLPQVALPWG MPLGIFGGVV GSLYGGGGPP IVAYLQMRHL DKRAFRATFQ GIALTDNILR AFMYIALALL TWQLTVGFFL LIPPVLLGLW TGNRLHLRIN QRTFLMGTLA VLAVVGLKYL I
|
| |