Gene Lferr_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1986 
Symbol 
ID6877974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1982319 
End bp1983074 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID642789855 
Productprotein of unknown function DUF81 
Protein accessionYP_002220410 
Protein GI198284089 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.368291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCT CTCTGTCCTA CGCCACGCTG ATCCAAAATC CATTGCTCTG GGCCATCGCG 
GGGGTGATCA TTCTGGTCGC CTTTTATGTC CGCGCAGTGA TCGGCTTTGG CTCCGGATTG
ATTTCCGTGG CGCTGCTGAC GCTTATTTTC CCCATCAAAG AAGTAGTGCC CGTGGTGCTG
CTGCTGGATC TGCTCGGTTC CGTATTGCTC GGCGCCTATG ACTTCCGGGA AATGCGCTGG
CCGGAGTTGC GCTGGCTGAT TCCCGGCAGC CTGATCGGGC TGGCTTTCGG CTCCTTTATC
CTCGCCGATA CCAATGCCCA GAATCTTACT CGCTTTCTCG GCGTGTTCAT TCTCGCCTAT
GTCTGTTATG CGCTGCTCAT GAAGCCTGAG CGACTACCCC AGGTCGCCTT GCCCTGGGGA
ATGCCGCTGG GAATTTTCGG TGGGGTGGTG GGCAGTTTGT ATGGCGGCGG AGGTCCGCCC
ATTGTCGCCT ATCTGCAAAT GCGTCATCTC GACAAGCGCG CCTTTCGCGC CACGTTTCAA
GGTATCGCCC TTACGGACAA TATTCTGCGG GCCTTTATGT ACATAGCGCT GGCCCTGCTG
ACCTGGCAAC TGACGGTGGG TTTTTTCCTG CTGATTCCAC CGGTGCTGCT CGGTCTGTGG
ACAGGTAATC GCTTACATCT GCGCATCAAT CAAAGGACTT TTCTCATGGG GACCCTCGCA
GTACTCGCAG TGGTCGGTTT GAAATATCTC ATCTGA
 
Protein sequence
MHASLSYATL IQNPLLWAIA GVIILVAFYV RAVIGFGSGL ISVALLTLIF PIKEVVPVVL 
LLDLLGSVLL GAYDFREMRW PELRWLIPGS LIGLAFGSFI LADTNAQNLT RFLGVFILAY
VCYALLMKPE RLPQVALPWG MPLGIFGGVV GSLYGGGGPP IVAYLQMRHL DKRAFRATFQ
GIALTDNILR AFMYIALALL TWQLTVGFFL LIPPVLLGLW TGNRLHLRIN QRTFLMGTLA
VLAVVGLKYL I