| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1937 |
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| Symbol | |
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| ID | 6877922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1927196 |
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| End bp | 1929517 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642789807 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002220365 |
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| Protein GI | 198284044 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00253489 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.908818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTACC TGTATATAAA ACCGTTATCT TCAGCAATGA TTGTTGCTGG ATTGATTATT
ACCATGACTG CGGTTGAACA AGCTGATGCA AAGACGACTA TAAATGTAGG TGAGGTAACT
GGATCGGCCG ATTCCACACA TTCTCCACTT CACAAGAAGC TTAAAAAGTT GGATAATAAG
TATACAAACA AGCAGGTTTT CAGAGAGACG CAGTCTGCTG TTGTCCTTGG CAATAAAAAC
AAGAAGATGA TAAGTCCCAA TGCGGGTGCT GCAGAATTGC TAGCAACAGC ACCAGGGGTA
CATATCATGA GTGAAAACCC ACAGAATGGT TCAGGAAGAT ATAATATATC TATTAATGGT
ATGGGTGTTG GCTGGTGGAG TGGTAATACT TATAGAAATC AGATTAGTGT GTTGTTTGAT
GGGATTCCGA TGAACAATCA AATAACCAAC GATGGTCAAT GGAACTCCAA CCAGATTCCT
ATTCTTGCAA TGATACATGG AGTTAACGTC ATCTATGGGC CAGGCAATCC CAAAGATCGT
TGGTATGACA GCCTGGGTGG CACCATCAAC TTTGTTCCGT TGCAACCAAC CACCAAGGCA
AATGCCAAGG CGAATTTATC AGTTGGAAGT TATGGCAGTA AAACTGCAAG TTTCTCATTG
AATACAGGAC ATTGGTATGG CTGGTCGACA GTATTGGCCG GTGGCTACAC CAGTGCCAAC
TCATTTTACC AAAGCCCAAG CAACTGGCCG CAGCATTCCT GGTCAGTATA TATGAAAACA
GCACATCCTT TCTCAAATGG TATGTTCACA TTCGGCTTTT ACTACGAAAA ATCAAACGCT
ACACATAGTC TCACCATTCC GGTCACCCCG ATAGCGGGAT ATTCGGTCAA CGGTTATGGC
AAGCCTGGGC AATTGTTGAG CCAGCAAACA AGTGGCTTCT ACTATGTGCC ATCATCGGAT
TTGTGGTACA AGAATGACAT TGTTGATTCT TATATACTTT ATTCACAACA AATTTTTGAT
CTGGGTGGCG GATGGACACT TAAAAATACG CCATGGTATC GCCATGCGTA CCGCCTGCAT
CAGGCCTATT TTAACTATGG TGCCTCTAGC TATAATCCAG AAGCGGCAGA GCATTACGCT
CCTACAAACA ATTCGTTCGG GGATCGTTTA GGGGCCAATC TTCACTCCCA TTACAATGAT
GTAGACCTGG GTGGCTGGTT ATCTTATCAG CAATACAATA CCAATGAAGA ACTTTGGAAT
CCATTATTGG GAACATCACA AAGTAATCCA TATGTATACA ATAATGTGGA GTTAAACACT
CTGTTCAGTA ATCTTTATGT GCAAGATACA ATAAAGCTCA TGAATAATCA TTTGCGGATA
ACTCCCGGAG TGGCACTGGC AAGTTTCTAT ACATCAATGA GCGATTTGGT CAATCCAGAT
ACTAAATCGA TCTACCTGAC TGCTACTCCA GGGGCAAAGA CCAACTTTAC GCGCTTTGAA
CCATCCTTGG GTATAAATTA CAAATTTCTC AAGAATTTTT CATTCTACGC GAACTATAGC
GAAACTTATC AAAATGAAAC TGATCTTGCC TATGGCGCCT ATTTACAAAA AATAGCAATT
AATCCAGCCG ATATACCGAT CACAAGAGCG GTAGATTATG AAGCGGGACT CCGATACCAC
AATAACACCA CAAATATCGG CATCAACTAT TATCATGACT ACCTGACGAA TTTGTTGAAC
GGCGTGTCCG GATCTATAAC CCAATTCAAT GCGTCAGGAT ACAATCTTGG AAATGCGATA
TACCAAGGTG TAAACGTTTA TGCTAAGTGG CGTCCAATGT GGCAATTGTA TGTTTATGGT
TCTGCCAACA TACAGCACTC TTACTATACC AAGGACTACA ATAATTCCGG AGTATCCTTC
AATGGAGTGA GACTATCAGG AATACCTCAT TATTCCTTTA ATTTGTCCGT TTCCTATAAA
TTCAGAACAC GCTACGGTAT TCTTGAACCG GTCCTTACCG ATCAGTACTC GGGCGGGCAG
TCTCTTTATA ATAATGTTAC CGGTGGCCCA ACCAATCAGA CTATAAACGC CTATAATATA
GTCAACTTAT CGGCCAGCTA CAAAACATTT GTTTTTAACC ATATTATTCC AGGCGCCAAG
GAAACGGATT TCAGTGTGGG AGTGTATAAC CTGTTAAACA GGAAGTATGA GTCAGATATT
TATCTGTCTA CAGGTGGATA CAATCCTCAG GAACAACCTT CGTTATTTGC TTATGCCGGC
GCACCTTTAC AAGTTTTTGG TGGCGTAACG GTCAAATTCT GA
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| Protein sequence | MIYLYIKPLS SAMIVAGLII TMTAVEQADA KTTINVGEVT GSADSTHSPL HKKLKKLDNK
YTNKQVFRET QSAVVLGNKN KKMISPNAGA AELLATAPGV HIMSENPQNG SGRYNISING
MGVGWWSGNT YRNQISVLFD GIPMNNQITN DGQWNSNQIP ILAMIHGVNV IYGPGNPKDR
WYDSLGGTIN FVPLQPTTKA NAKANLSVGS YGSKTASFSL NTGHWYGWST VLAGGYTSAN
SFYQSPSNWP QHSWSVYMKT AHPFSNGMFT FGFYYEKSNA THSLTIPVTP IAGYSVNGYG
KPGQLLSQQT SGFYYVPSSD LWYKNDIVDS YILYSQQIFD LGGGWTLKNT PWYRHAYRLH
QAYFNYGASS YNPEAAEHYA PTNNSFGDRL GANLHSHYND VDLGGWLSYQ QYNTNEELWN
PLLGTSQSNP YVYNNVELNT LFSNLYVQDT IKLMNNHLRI TPGVALASFY TSMSDLVNPD
TKSIYLTATP GAKTNFTRFE PSLGINYKFL KNFSFYANYS ETYQNETDLA YGAYLQKIAI
NPADIPITRA VDYEAGLRYH NNTTNIGINY YHDYLTNLLN GVSGSITQFN ASGYNLGNAI
YQGVNVYAKW RPMWQLYVYG SANIQHSYYT KDYNNSGVSF NGVRLSGIPH YSFNLSVSYK
FRTRYGILEP VLTDQYSGGQ SLYNNVTGGP TNQTINAYNI VNLSASYKTF VFNHIIPGAK
ETDFSVGVYN LLNRKYESDI YLSTGGYNPQ EQPSLFAYAG APLQVFGGVT VKF
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